Table 3.
Cluster size |
|||||||
GeneID | Type | Gene | Compound (if known) | Predicted | Known | Medium | Source |
AN11194 | DMATS | 18 | Solid | ||||
AN11202 | DMATS | 18 | Solid | ||||
AN9259 | DMATS | 12 | 10 | Both | (30) | ||
AN8514 | DMATS | tdiB | Terrequinone A | 3* | 5 | Solid | (21, 22) |
AN11080 | DMATS | nptA | Nidulanin A | 1 | Both | This study | |
AN10289 | DMATS | 1 | Solid | ||||
AN6784 | DMATS | xptA | Variecoxanthone A | 1 | 1 | Solid | (8–10) |
AN1594 | DTS | Ent-pimara-8(14),15-diene | 9 | 9 | Solid | (25) | |
AN3252 | DTS | 7 | Solid | ||||
AN9314 | DTS | 2 | Solid |
This table contains predicted DMATSs, functionally prenyltransferases, and three DTSs predicted by Bromann et al. (25). The medium column describes on which type of medium (liquid, solid, or both) the cluster is expressed. For gene clusters with identified functions and gene members, the number of identified cluster members is given as well as references to the original papers. Further details on the cluster members and the expression profiles of the individual clusters may be found in Dataset S2, and Fig. S4. Chemical structures of all compounds may be found in Fig. S1.
*Extent of the gene cluster is predicted correctly. The difference is due to the absence of two of the genes on the legacy microarray data, which removes them from the prediction.