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. 2013 Jan 7;3:1030. doi: 10.1038/srep01030

Table 1. Comparison of genomic composition.

  ActE S. coelicolor S. griseus C. thermocellum C. japonicus
Genome size (nt) 7414440 8667507 8545929 3843301 4576573
Proteome size 6357 8153 7136 3173 3750
Total CAZy Proteins 167 221 132 103 183
% CAZy Proteinsa 2.6% 2.7% 1.8% 3.2% 4.9%
Total GHb 119 154 80 70 124
Total PLc 6 11 4 6 14
Total CEd 29 36 23 20 28
Total CBMe 85 98 68 121 134
antiSMASH clustersf 22 24 37 3 4
Genes in clusters 620 718 1139 89 111
% antiSMASH 9.8% 8.8% 16.0% 2.8% 3.0%

aProteins classified as Carbohydrate Active Enzymes (CAZy).

bGH, glycoside hydrolase.

cPL, pectate lyase.

dCE, carbohydrate esterase.

eCBM, carbohydrate binding module.

fPutative antibiotic producing gene cluster.