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| Endosymbionts Genes | Cospeciation | Duplication | Host switch | Sorting |
| P-Endosymbionts (16S rRNA) | 12 | 0 | 2 | 2 |
| Arsenophonus (23S rRNA) | 5 | 0 | 4 | 4 |
| Wolbachia (wsp) | 8 | 0 | 7 | 13 |
| Wolbachia (fstZ) | 6 | 1 | 3 | 14 |
| Cardinium (16S rRNA) | 3 | 0 | 1 | 1 |
The reconstruction shows the co-phylogenetic analysis between the mtCOI gene of B. tabaci cryptic species with the genes of their primary endosymbionts and secondary endosymbionts.
