Table 5.
Protein names and lengths (in aminoacids, aa) for the five most redundant hits in each transcriptome
| # Hits | Protein name and[species name] | Putative transposable element | Protein length(aa) | Accession number |
|---|---|---|---|---|
|
Petrosia ficiformis |
|
|
|
|
| x9 |
PREDICTED: hypothetical protein LOC100641198 [Amphimedon queenslandica] |
- |
673 |
XP_003382742 |
| x9 |
PREDICTED: hypothetical protein LOC100639583 [Amphimedon queenslandica] |
yes |
1768 |
XP_003390293 |
| x10 |
PREDICTED: RING finger protein 213-like [Amphimedon queenslandica] |
- |
5361 |
XP_003389786 |
| x12 |
ankyrin 2,3/unc44 [Aedes aegypti] |
- |
789 |
XP_001649474 |
| x16 |
PREDICTED: hypothetical protein LOC100637079 [Amphimedon queenslandica] |
- |
41943 |
XP_003386025 |
|
Crella elegans |
|
|
|
|
| x25 |
Collagen protein [Suberites domuncula] |
- |
282 |
CAC81019 |
| x36 |
aggregation factor protein 3, form C [Microciona prolifera] |
- |
2205 |
AAC33162 |
| x38 |
PREDICTED: deleted in malignant brain tumors 1 protein-like [Amphimedon queenslandica] |
- |
3131 |
XP_003389240 |
| x46 |
PREDICTED: hypothetical protein LOC100640736 [Amphimedon queenslandica] |
- |
5715 |
XP_003383871 |
| x193 |
PREDICTED: hypothetical protein LOC100637079 [Amphimedon queenslandica] |
- |
41943 |
XP_003386025 |
|
Cephalothrix hongkongiensis |
|
|
|
|
| x14 |
pol-like protein [Ciona intestinalis] |
yes |
1235 |
BAC82623 |
| x14 |
pol-like protein [Ciona intestinalis] |
yes |
1263 |
BAC82626 |
| x15 |
PREDICTED: similar to ORF2-encoded protein, partial [Hydra magnipapillata] |
yes |
372 |
XP_002155414 |
| x15 |
PREDICTED: Pao retrotransposon peptidase family protein-like [Saccoglossus kowalevskii] |
- |
1559 |
XP_002731015 |
| x23 |
putative zinc finger protein [Schistosoma mansoni] |
- |
486 |
CCD80531 |
|
Cerebratulus marginatus |
|
|
|
|
| x9 |
PREDICTED: hypothetical protein LOC497165 [Danio rerio] |
yes |
2265 |
XP_003200870 |
| x11 |
ORF2-encoded protein [Danio rerio] |
yes |
1027 |
BAE46429 |
| x11 |
PREDICTED: similar to ORF2-encoded protein, partial [Strongylocentrotus purpuratus] |
yes |
1117 |
XP_001187755 |
| x11 |
PREDICTED: similar to ORF2-encoded protein [Strongylocentrotus purpuratus] |
yes |
1124 |
XP_001189850 |
| x11 |
PREDICTED: hypothetical protein LOC100535924 [Danio rerio] |
- |
1448 |
XP_003199942 |
|
Octopus vulgaris |
|
|
|
|
| x38 |
PREDICTED: hypothetical protein LOC100609033 [Pan troglodytes] |
yes |
255 |
XP_003317434 |
| x44 |
PREDICTED: hypothetical protein LOC100597269 [Nomascus leucogenys] |
yes |
220 |
XP_003276349 |
| x57 |
PREDICTED: hypothetical protein LOC100414382, partial [Callithrix jacchus] |
yes |
178 |
XP_002762361 |
| x57 |
PREDICTED: zinc finger protein 91-like [Acyrthosiphon pisum] |
- |
818 |
XP_003243211 |
| x90 |
PREDICTED: hypothetical protein LOC100608502, partial [Pan troglodytes] |
yes |
211 |
XP_003315526 |
|
Chiton olivaceus |
|
|
|
|
| x16 |
predicted protein [Nematostella vectensis] |
yes |
1079 |
XP_001630327 |
| x17 |
PREDICTED: similar to tyrosine recombinase [Strongylocentrotus purpuratus] |
- |
461 |
XP_001183896 |
| x22 |
pol-like protein [Biomphalaria glabrata] |
yes |
1222 |
ABN58714 |
| x29 |
hypothetical protein EAI_13357 [Harpegnathos saltator] |
- |
172 |
EFN88744 |
| x48 |
PREDICTED: similar to ORF2-encoded protein, partial [Hydra magnipapillata] |
yes |
372 |
XP_002155414 |
|
Sipunculus nudus |
|
|
|
|
| x7 |
dopamine beta hydroxylase-like protein, partial [Pomatoceros lamarckii] |
- |
504 |
ADB11406 |
| x7 |
pol-like protein [Ciona intestinalis] |
yes |
1263 |
BAC82626 |
| x7 |
PREDICTED: similar to transposase [Strongylocentrotus purpuratus] |
yes |
1312 |
XP_001193486 |
| x9 |
pol-like protein [Ciona intestinalis] |
yes |
1235 |
BAC82623 |
| x11 |
lectin 1B [Arenicola marina] |
- |
243 |
ADO22714 |
|
Hormogaster samnitica |
|
|
|
|
| x15 |
leechCAM [Hirudo medicinalis] |
- |
858 |
AAC47655 |
| x15 |
pannexin 4 [Aplysia californica] |
- |
413 |
NP_001191576 |
| x16 |
predicted protein [Nematostella vectensis] |
- |
2047 |
XP_001624963 |
| x19 |
hypothetical protein CBG_27119 [Caenorhabditis briggsae AF16] |
- |
224 |
CAR99373 |
| x24 |
tractin [Hirudo medicinalis] |
- |
1880 |
AAC47654 |
|
Metasiro americanus |
|
|
|
|
| x14 |
transglutaminase [Limulus polyphemus] |
- |
764 |
2012342A |
| x15 |
putative reverse transcriptase [Takifugu rubripes] |
yes |
851 |
AAK58879 |
| x30 |
hypothetical protein BRAFLDRAFT_210900 [Branchiostoma floridae] |
- |
489 |
XP_002611360 |
| x39 |
hypothetical protein BRAFLDRAFT_79800 [Branchiostoma floridae] |
- |
512 |
XP_002597956 |
| x53 |
hypothetical protein BRAFLDRAFT_89523 [Branchiostoma floridae] |
- |
396 |
XP_002590717 |
|
Alipes grandidieri |
|
|
|
|
| x55 |
PREDICTED: similar to predicted protein [Hydra magnipapillata] |
yes |
1371 |
XP_002161911 |
| x56 |
Transposable element Tcb1 transposase [Salmo salar] |
yes |
281 |
ACN11475 |
| x57 |
hypothetical protein TcasGA2_TC002110 [Tribolium castaneum] |
yes |
346 |
EEZ99596 |
| x58 |
hypothetical protein EAG_05969 [Camponotus floridanus] |
yes |
282 |
EFN71217 |
| x123 | hypothetical protein TcasGA2_TC000717 [Tribolium castaneum] | yes | 346 | EEZ98274 |
Their putative transposable element nature is indicated, as well as the Genbank accession number for each protein.