Table 2. Best fit parameters for the biphasic activation-inhibition dose-response curves with DAPTa.
ng/mL of pSG5-cDNAwtC99 used to transfect HeLa cells | ||||||
Data from Fig. 2A a : | 0 | 15 | 25 | 61 | 92 | Average |
Initial Activity, IA | 32 ± 3 | 41 ± 3 | 51 ± 5 | 91 ± 6 | 119 ± 4 | n.a. c |
[2σ CI] b | [27, 37] | [34, 46] | [43, 59] | [81, 99] | [111, 127] | |
Maximal Activity, MA | 217 ± 110 | 172 ± 90 | 205 ± 80 | 180 ± 145 | 170 ± 95 | 189 |
[2σ CI] b | [470, 133] | [380, 120] | [510, 121] | [430, 160] | [-, -] | |
Maximal Inhibition, MI | -1 ± 0.1 | 0.33 ± 0.7 | -0.2 ± 0.1 | 1.2 ± 0.2 | 1.9 ± 0.6 | 0.5 ± 0.2 |
[2σ CI] b | [-1.75, 1.1] | [-1.0, 2.1] | [-1.5, 0.9] | [-1.36, 0.86] | [-2.7, 2.9] | |
Activation EC50, nM | 89 ± 17 | 71 ± 21 | 110 ± 34 | 107 ± 36 | 178 ± 45 | 111 ± 41 |
[2σ CI] b | [50, 240] | [105, 243] | [53, 251] | [22, 160] | [-, -] | |
Activation Hill coef. | 1.04 ± 0.2 | 1.08 ± 0.2 | 1.0 ± 0.1 | 1.13 ± 0.6 | 0.92 ± 0.3 | 1.0 ± 0.1 |
[2σ CI] b | [0.85, 1.35] | [0.9, 1.45] | [0.9, 1.3] | [0.87, 1.28] | [0.61, 1.5] | |
Inhibition IC50, nM | 407 ± 34 | 588 ± 35 | 524 ± 71 | 489 ± 62 | 661 ± 80 | 534 ± 53 |
[2σ CI] b | [479, 724] | [269, 550] | [457, 562] | [150, 602] | [525, 732] | |
Inhibition Hill’s coef | 2 ± 0.3 | 2.4 ± 0.3 | 2.2 ± 0.4 | 2.3 ± 0.5 | 1.7 ± 0.6 | 2,1 ± 0.2 |
[2σ CI] b | [1.4, 2.9] | [1.6, 3.13] | [1.6, 2.9] | [1.6, 3.0] | [-, -] |
The units for all activity measurements are: Aβ 1-40 secreted in pM per 106 cells.
the best fit values ± standard error were calculated using nonlinear regression and eqn.1.
two sigma confidence intervals as indicated in methods section [34].
not applicable, or the corresponding values could not be resolved in the current experiments.
no activation is observed when DNA concentration is higher than 250 ng/ml. Thus starting at 250 ng/ml the best fit values ± standard error were calculated using a nonlinear regression and eqn.2.