Table 6.

TFs associated with bottom 3 modules

Schema	Nodes	TFs identified
Un-weighted	3	REST, ITF2, TF7L2, Elk-1, GATA-1, SRF
	4	FOXA1, FOXA2, FOXA3, GLI1, GLI2
	5	ESR2, ITF2, TF7L2, Lef1, REST, c-Myc, PPARD, SLUG
	6	CREB1, c-Jun, DAND5, SP1, SP3, TNF11, HAND1, VDR, STAT1, STAT3
Weighted	3	GATA-1, ITF2, REST, TF7L2, SRF, Elk-1
	4	GLI1, GLI2, FOXA1, FOXA2, FOXA3
	5	ESR2, ITF2, Lef1, c-Myc, PPARD, REST, TF7L2
	6	CREB1, c-Jun, DAND5, SP1, SP3, NF-kB/TNFRSF11A, NF-kB-P65, HAND1, STAT3, STAT1, VDR, KPCA