Table 5.
Case No. | Reference Diagnosis | Sex |
GEP |
EP1 |
EP2 |
EP3 |
EP4 |
EP5 |
EP Overall, for 50 case reviews |
||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Result | Highest SS | H&E | Int | Final | All | H&E | Int | Final | All | H&E | Int | Final | All | H&E | Int | Final | All | H&E | Int | Final | All | H&E | Int | All | |||
Case 1 |
OV |
F |
OV |
97.6 |
BR |
OV |
OV |
OV |
OV |
OV |
|
OV |
OV |
OV |
|
OV |
OV |
OV |
|
OV |
OV |
OV |
OV |
OV |
-- |
-- |
-- |
Case 2 |
CO |
M |
CO |
89.9 |
CO |
CO |
|
CO |
CO |
CO |
|
CO |
CO |
CO |
|
CO |
PA |
PA |
|
PA |
CO |
LU |
LU |
LU |
-- |
-- |
-- |
Case 3 |
CO |
M |
CO |
87.6 |
CO |
CO |
|
CO |
CO |
CO |
|
CO |
CO |
CO |
|
CO |
LU |
CO |
|
CO |
CO |
CO |
CO |
CO |
-- |
-- |
-- |
Case 4 |
BR |
F |
BR |
97.6 |
LU |
OV |
OV |
OV |
LU |
LU |
|
LU |
BR |
BR |
PA |
PA |
OV |
OV |
PA |
PA |
OV |
OV |
OV |
OV |
-- |
-- |
-- |
Case 5 |
KI |
M |
KI |
86.4 |
KI |
KI |
|
KI |
KI |
KI |
|
KI |
KI |
KI |
|
KI |
LU |
KI |
|
KI |
KI |
KI |
KI |
KI |
-- |
-- |
-- |
Case 6 |
ME |
F |
ME |
67.4 |
LY |
ME |
ME |
ME |
BR |
BR |
|
BR |
LI |
ME |
ME |
ME |
BR |
ME |
ME |
ME |
LU |
ME |
ME |
ME |
-- |
-- |
-- |
Case 7 |
BL |
M |
BL |
45.1 |
GC |
PA |
BL |
|
LU |
GA |
|
GA |
LU |
LU |
BL |
BL |
LU |
BL |
|
BL |
BR |
BL |
PA |
PA |
-- |
-- |
-- |
Case 8 |
SC |
M |
SC |
76.1 |
SC |
SC |
|
SC |
LI |
SC |
|
SC |
SC |
SC |
SC |
SC |
LI |
ME |
|
ME |
KI |
LI |
LI |
LI |
-- |
-- |
-- |
Case 9 |
GA |
M |
GA |
36.9 |
GA |
GA |
|
GA |
SC |
GA |
GA |
GA |
GA |
GA |
GA |
GA |
PA |
PA |
|
PA |
LY |
GA |
GA |
GA |
-- |
-- |
-- |
Case 10 |
LU |
M |
OV |
24.4 |
BL |
BL |
|
BL |
BL |
BL |
|
BL |
BL |
BL |
BL |
BL |
BL |
BL |
|
BL |
BL |
BL |
BL |
BL |
-- |
-- |
-- |
No. incorrect |
|
|
1 |
|
5 |
3 |
|
2 |
6 |
4 |
|
4 |
3 |
2 |
|
2 |
9 |
5 |
|
5 |
6 |
4 |
5 |
5 |
29 |
19 |
18 |
No. correct |
|
|
9 |
|
5 |
7 |
|
8 |
4 |
6 |
|
6 |
7 |
8 |
|
8 |
1 |
5 |
|
5 |
4 |
6 |
5 |
5 |
21 |
31 |
32 |
% correct | 90% | 50% | 70% | 80% | 40% | 60% | 60% | 70% | 80% | 80% | 10% | 50% | 50% | 40% | 60% | 50% | 50% | 42% | 62% | 64% |
The tumor tissue is indicated by a two-letter code: bladder (BL), breast (BR), colorectal (CO), gastric (GA), testicular germ cell (GC), kidney (KI), hepatocellular (LI), non-small cell lung (LU), non-Hodgkin’s lymphoma (LY), melanoma (ME), ovarian (OV), pancreas (PA), prostate (PR), thyroid (TH) and sarcoma (SC). SS – Similarity Score, a measure of the similarity of the RNA expression pattern of the specimen to the RNA expression pattern of the indicated tissue. Similarity Scores range from 0 (very low similarity) to 100 (very high similarity) and sum to 100 across all 15 tissues on the GEP Test panel. The incorrect predictions are indicated with yellow highlight. Grey indicates no stains ordered.