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. 2013 Jan;20(1):1–18. doi: 10.1089/cmb.2012.0244

Table 1.

Effect of Dirichlet Process Parameters

β γ Best Δ (bits/a.a.) Number of components Iteration found β γ Best Δ (bits/a.a.) Number of components Iteration found
100 5 1.0756 470 950 600 5 1.0757 361 980
  10 1.0758 520 860   10 1.0760 406 960
  20 1.0759 644 980   20 1.0762 471 930
  40 1.0760 689 980   40 1.0762 481 980
  60 1.0760 720 800   60 1.0763 533 910
  80 1.0760 717 630   80 1.0762 526 900
  100 1.0760 808 1000   100 1.0762 541 780
200 5 1.0757 449 1000 800 5 1.0757 341 1000
  10 1.0759 498 840   10 1.0759 378 1000
  20 1.0761 586 960   20 1.0761 431 960
  40 1.0761 597 600   40 1.0761 466 830
  60 1.0762 665 750   60 1.0762 472 830
  80 1.0762 709 870   80 1.0762 471 730
  100 1.0762 679 590   100 1.0762 499 760
400 5 1.0757 400 980 1000 5 1.0755 314 1000
  10 1.0760 452 910   10 1.0758 350 1000
  20 1.0762 505 960   20 1.0759 375 990
  40 1.0763 562 860   40 1.0760 429 860
  60 1.0763 588 1000   60 1.0761 433 910
  80 1.0763 603 990   80 1.0761 447 910
  100 1.0763 623 940   100 1.0761 444 990

a.a., amino acids.