Table 3.
Virulence genes, primers and DNA target sequence sizes (amplicons) of multiplex PCRs
Gene | Primers (5′- 3>′) | Amplicon (bp) | References |
---|---|---|---|
stx |
F- GAGCGAAATAATTTATATGTG |
518 |
[17] |
R- TGATGATGGCAATTCAGTAT | |||
eae |
F- CCCGAATTCGGCACAAGCATAAGC |
881 |
[17] |
R- CCCGGATCCGTCTCGCCAGTATTCG | |||
sigA |
F- CCGACTTCTCACTTTCTCCCG |
430 |
[20] |
R- CCATCCAGCTGCATAGTGTTTG | |||
sepA |
F- GCAGTGGAAATATGATGCGGC |
794 |
[20] |
R- TTGTTCAGATCGGAGAAGAACG | |||
pic |
F- ACTGGATCTTAAGGCTCAGGAT |
572 |
[20] |
R- GACTTAATGTCACTGTTCAGCG | |||
aggR |
F- GTATACACAAAAGAAGGAAGC |
254 |
[17] |
R- ACAGAATCGTCAGCATCAGC | |||
ipaH |
F- GTTCCTTGACCGCCTTTCCGATACCGTC |
619 |
[17] |
R- GCCGGTCAGCCACCCTCTGAGAGTAC | |||
elt |
F- TCTCTATGTGCATACGGAGC |
322 |
[17] |
R- CCATACTGATTGCCGCAAT | |||
pet |
F- GGCACAGAATAAAGGGGTGTTT |
302 |
[20] |
R- CCTCTTGTTTCCACGACATAC | |||
sat | F-TCAGAAGCTCAGCGAATCATTG |
930 | [20] |
R-CCATTATCACCAGTAAAACGCACC |