Table 3.
Virulence gene profiles and phylogeny groups in ExPEC isolates (n = 48) and their distribution in marinated and non-marinated poultry meat at Finnish retail market
| Combinations of genes | Phylogeny group | Non-marinated meat (n = 40) | Marinated meat (n = 167) |
|---|---|---|---|
|
cva, vat, iucD, papC, irp2, iss, kpsMt K1 |
B2svg+ |
0 |
2 |
|
cva, vat, tsh, iucD, irp2, iss, ibeA, kpsMT K1 |
B2 |
0 |
3 |
|
cva, vat, tsh, iucD, papC, iss, astA |
D |
0 |
1 |
|
cva, iucD, irp2, iss, astA, kpsMt K1 |
D |
1 |
0 |
|
cva, iucD, irp2, astA, kpsMt K1 |
D |
0 |
1 |
|
vat, iucD, papC, irp2, iss, astA, kpsMT K1 |
D |
1 |
0 |
|
iucD, papC, irp2, iss, astA, kpsMT K1 |
D |
0 |
6 |
|
iucD, irp2, iss, astA, kpsMT K1 |
D |
2 |
4 |
|
iucD, irp2, astA, kpsMT K1 |
D |
3 |
17 |
|
iucD, iss, astA, kpsMT K1 |
D |
0 |
2 |
|
iucC, papC, irp2, iss |
B2 |
2 |
0 |
|
iucC, irp2, kpsMT K1 |
D |
1 |
0 |
|
iucD, papC |
B2 and D |
0 |
2 |
| negative | various | 30 | 129 |