Table 3. Break points (in nucleotides) and percentage improvement in AIC (dAIC) or small sample AIC (dc-AIC) score compared with concatenated segments using SBP or GARD algorithms from HyPhy.
Segment A | Segment B | Actual break point | SBP break | SBP dAIC (%) | GARD break | GARD dc-AIC (%) |
1 | 2 | 2287 | 2291 | 5.8 | 2292 | 4.7 |
1 | 3 | 2287 | 2294 | 4.4 | 2295 | 3.5 |
2 | 3 | 2281 | 2285 | 3.8 | 2286 | 3.1 |