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. Author manuscript; available in PMC: 2014 Jan 10.
Published in final edited form as: J Med Chem. 2012 Dec 21;56(1):182–200. doi: 10.1021/jm3014458

Table 1.

Tdp1 and Top1 Inhibitory Activity

Compd Tdp1 Top1 Compd Tdp1a Top1b
1 ++ +++ 40 ++(+) ++(+)
2 +++ NT 41 0 0
9 0 0 42 0 0
10 0 0 43 +++ 0
11 0 (+) 49 0 +++
12 0 + 50 0 +
13 0 0 51 ++ ++
14 + ++ 52 (+) +++
15 0 +(+) 53 0 ++
18 0 0 54 +++ ++++
19 0 0 55 +++ ++++
20 0 0 56 0 ++
22 +(+) 0 57 ++ 0
23 ++(+) ++(+) 58 0 +
24 + (+) 59 + +(+)
25 + 0 60 +(+) ++(+)
26 + (+) 61 0 0
29 + (+) 62 ++(+) ++(+)
30 0 0 63 0 ++
31 + (+) 72 0 ++
32 0 + 73 0 ++
33 0 + 74 ++ +++
34 0 + 77 0 ++(+)
35 0 0 84 +++ +(+)
36 0 + 85 +(+) +++
38 0 0 89 +++ ++(+)
a

Tdp1 IC50 was determined by duplicate using a semiquantitative scale: 0, IC50 > 111 μM; +, IC50 between 37–111 μM; ++, IC50 between 12–37 μM; +++, IC50 between 1–12 μM, ++++, IC50 < 1 μM. Active compounds were further evaluated for a more accurate value.

b

Compound-induced DNA cleavage due to Top1 inhibition is graded by the following semiquantitative scale relative to 1 μM camptothecin (90) or MJ-III-65 (91): 0, no detectable activity; +, weak activity; ++, similar activity to compound 91; +++, greater activity than 91; ++++, equipotent to 90. The (+) ranking indicates the activity lies between two given values.

NT: not tested.