Table 1. Strains used in this study.
Strain | Relevant characteristics | Ottemann strain | Reference or source |
E. coli strains | |||
RP437 | E. coli K-12 derivative, chemotactic wild-type | KO40 | Parkinson (1978) |
RP8611 | E. coli K-12 derivative Δtsr, Δtar-tap, Δtrg | KO186 | J. S. Parkinson* (Surette & Stock, 1996) |
H. pylori strains | |||
G27 | Wild-type | N. Salama† (Censini et al., 1996) | |
mG27 | Mouse-adapted isolate of G27 | KO625 | Castillo et al. (2008) |
mG27m | Soft agar-selected mG27 isolate | KO1253 | This study |
mG27m cheY | mG27m ΔcheY : : cat; CmR | KO1257 | This study (cheY allele in Terry et al., 2005) |
mG27m tlpD | mG27m ΔtlpD : : cat; CmR | KO1259 | This study (tlpD allele in Williams et al., 2007) |
SS1 | Wild-type | KO441 | J. O’Rourke‡ (Lee et al., 1997) |
SS1 cheA | SS1 ΔcheA : : cat; CmR | KO855 | Terry et al. (2005) |
SS1 tlpA | SS1 ΔtlpA : : cat; CmR | KO661 | Andermann et al. (2002) |
SS1 tlpC | SS1 ΔtlpC : : cat; CmR | KO565 | Andermann et al. (2002) |
SS1 tlpD | SS1 ΔtlpD : : cat; CmR | KO914 | Williams et al. (2007) |
J99 | Wild-type | KO479 | N. Salama† (Alm et al., 1999) |
CYP3401 | Wild-type | KO637 | D. Berg§ (Mizote et al., 1997) |
M6 | Wild-type | KO613 | E. Joyce|| (Eaton et al., 2002) |
ATCC43504 | Wild-type | KO669 | ATCC. Also known as NCTC 11637 (Joyce et al., 2000) |
The University of Utah.
Fred Hutchinson Cancer Research Center.
University of New South Wales.
Washington University, St. Louis and University of California, San Diego.
Tufts University School of Medicine.