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. 2012 Dec 18;12:296. doi: 10.1186/1471-2180-12-296

Table 3.

Primers used for yitR amplification, creation of KIM6+ΔyitA-yipB, and creation of YitA and YipA-β-lactamase fusion proteins

Primer Designation Sequencea
YitR Forward Primer
5-AGTTGAGCTCGTCTGCATTGATTATTTGACC-3
YitR Reverse Primer
5-AGTTTCTAGAGATCGTTGCGTAGCTGTGTTGC-3
YitA-YipB KO Primer Forward
5-TGGCATCAATAAACTGGCCTTTTCTGTTGCAC
CAAAAATATGTGTAGGCTGGAGCTGCT-3
YitA-YipB KO Primer Reverse
5-TTCCCTATTCAAAATAGGGAAGGTGTTTAAAA
TTAATAAACATATGAATATCCTCCTTA-3
YitA C-terminus Forward
5-ATCTCTAGACCCCAGAACACCCCATGTAT-3
YitA C-terminus Reverse
5-GATCTCGAGAAGATTAACTCTTAGCTTGT-3
YitA Downstream Forward
5-ATCCTCGAGGTCGACAAAAACGTTATTACATCCAA-3
YitA Downstream Reverse
5-GATGCATGCCTGATTTGACTGATTTTTCC-3
YipA C-terminus Forward
5-ATCTCTAGAAGAGACTTAAAGCATATGGT-3
YipA C-terminus Reverse
5-GATCTCGAGTCGATTCTGTTTGCTATATA-3
YipA Downstream Forward
5-ATCCTCGAGGTCGACTTAAGAATATTAAGGAGCCA-3
YipA Downstream Reverse
5-GATGCATGCTGGCCGTTCAGGTTGCAGTT-3
Mature β-lactamase Forward
5-ATCCTCGAGCACCCAGAAACGCTGGTGA-3
Mature β-lactamase Reverse 5-GATGTCGACTTACCAATGCTTAATCAGTGA-3

a Underlined sequence denotes restriction enzyme site addition.