Table 2.
Sensitivity and specificity for gene detection by microarray among 11 sequenced A. actinomycetemcomitans strains
| Complete Genome | ||
|---|---|---|
| Strain | Sensitivity | Specificity |
| D7S-1 | 0.986 | 0.976 |
| D7S-1 | 0.986 | 0.867 |
| HK1651 | 0.984 | 0.986 |
| HK1651 | 0.985 | 0.986 |
| ANH9381 | 0.948 | 0.978 |
| ANH9381 | 0.986 | 0.981 |
| D11S-1 | 0.979 | 0.967 |
| Draft Genome | ||
| Strain | Sensitivity | Specificity |
| I63B | 0.989 | 0.980 |
| SCC393 | 0.983 | 0.977 |
| SCC393 | 0.986 | 0.977 |
| D18P-1 | 0.981 | 0.971 |
| D18P-1 | 0.988 | 0.977 |
| SCC1398 | 0.984 | 0.979 |
| SCC1398 | 0.985 | 0.981 |
| I23C | 0.983 | 0.900 |
| I23C | 0.983 | 0.902 |
| D17P-2 | 0.986 | 0.977 |
| D17P-2 | 0.984 | 0.977 |
| SCC2302 | 0.977 | 0.912 |
| SCC2302 | 0.974 | 0.986 |
Sensitivity=(number of genes in the genome detected by CGH)/(number of genes identified in the genome by WGS). Specificity= (number of genes in the genome not detected by CGH)/(number of genes not found in the genome by WGS).