Table 3.
Characteristics of the eye and hair color pathway proteins
| Protein | Gene | Entrez gene ID | Chr | Start (bp) | End (bp) | Size (kb) | SNPs | Coverage |
|---|---|---|---|---|---|---|---|---|
| ASIP | ASIP | 434 | 20 | 32,311,832 | 32,320,809 | 8.98 | 5 | 50.00% |
| HERC2 | HERC2 | 8924 | 15 | 26,029,783 | 26,240,890 | 211.11 | 9 | 41.67% |
| IRF4 | IRF4 | 3662 | 6 | 336,739 | 356,443 | 19.70 | 14 | 65.00% |
| MC1R | MC1R | 4157 | 16 | 88,511,788 | 88,514,886 | 3.10 | 3 | 33.33% |
| OCA2 | OCA2 | 4948 | 15 | 25,673,616 | 26,018,053 | 344.44 | 82 | 58.00% |
| SLC24A4 | SLC24A4 | 123041 | 14 | 91,858,678 | 92,037,578 | 178.90 | 62 | 53.68% |
| SLC45A2 | SLC45A2 | 51151 | 5 | 33,980,478 | 34,020,537 | 40.06 | 15 | 44.83% |
| TYR | TYR | 7299 | 11 | 88,550,688 | 88,668,575 | 117.89 | 22 | 56.00% |
| TYRP1 | TYRP1 | 7306 | 9 | 12,683,386 | 12,700,266 | 16.88 | 11 | 50.00% |
| Total | 223 | |||||||
Chr Chromosome position of the gene according to NCBI Build 36, Start (bp) start position of the gene according to NCBI Build 36, End (bp) end position of the gene according to NCBI Build 36, Coverage coverage of genes based on Phased data HapMap II release 22 CEU