Table 3.
PROGRAM | ESEfinder | ESRSearch | RESCUE_ESE | TFSearch | Consite | OGPET | ||
---|---|---|---|---|---|---|---|---|
SNPs |
Amino acid changes |
DNA position |
Splice sites |
Splice sites |
Splice sites |
transcription factor binding sites |
transcription factor binding sites |
O-glycosylation site prediciton [%] |
rs147094247 |
Thr175Asp |
g.2749C/A |
changed |
changed |
not changed |
not changed |
not changed |
33.1829 |
rs7498665 |
Thr484Ala |
g.8164A/G |
changed |
changed |
not changed |
not changed |
not changed |
--- |
rs60604881 |
--- |
g.8250C/T |
changed |
SRp40, FOX1-FOX2a |
not changed |
not changed |
not changed |
--- |
rs62037368 |
--- |
g.8738A/G |
changed |
not changed |
not changed |
not changed |
COUP-TF, c-REL b |
--- |
rs62037369 |
--- |
g.8764C/T |
changed |
changed |
not changed |
GATA1, GATA2, MZF1b |
not changed |
--- |
g.9483C/T |
βThr656Ile, γPro674Ser |
g.9483C/T |
changed |
not changed |
not changed |
GATA1, GATA2 b |
not changed |
53.5329 |
g.10182C/A | --- | g.10182C/A | changed | PESS a | not changed | not changed | not changed | --- |
a particular changed predicted splice sites, b particular changed predicted transcription factor binding sites.