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. 2013 Jan 14;8(1):e54057. doi: 10.1371/journal.pone.0054057

Table 1. Sequences of AFLP and MSAP adapters and primers used in this study.

Adaptors
EcoR I-adaptors-F 5′CTCGTAGACTGCGTACC3′
EcoR I-adaptors-R 5′AATTGGTACGCAGTC3′
Mse I-adaptors-F 5′GACGATGAGTCCTGAG3′
Mse I-adaptors-R 5′TACTCAGGACTCAT3′
Hpa II/Msp I-adaptors-F 5′GATCATGAGTCCTGCT3′
Hpa II/Msp I-adaptors-R 5′CGAGCAGGACTCATGA3′
Preselective primers
EcoR I-A 5′GACTGCGTACCAATTCA3′
Mse I-C 5′GACGATGAGTCCTGAGTAAC3′
Hpa II/Msp I-T 5′ATCATGAGTCCTGCTCGGT3′
Selective primer combinations used in AFLP
EcoR I-AAC+ Mse I-CTC EcoR I-ACC+ Mse I-CAA
EcoR I-AAC+ Mse I-CTG EcoR I-AGG+ Mse I-CAA
EcoR I-ACT+ Mse I-CTG EcoR I-ACG+ Mse I-CAA
EcoR I-ACA+ Mse I-CAA EcoR I-ACG+ Mse I-CAA
Selective primer combinations used in MSAP
EcoR I-AAC+ Hpa II/Msp I-TTCT (E1HM7) EcoR I-AAG+ Hpa II/Msp I-TTGC (E2HM2)
EcoR I-AAC+ Hpa II/Msp I-TCGA (E1HM1) EcoR I-AAG+ Hpa II/Msp I-TCGA (E2HM1)
EcoR I-AAC+ Hpa II/Msp I-TCCA (E1HM3)