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. 2013 Jan 14;8(1):e53947. doi: 10.1371/journal.pone.0053947

Table 5. Identification of segregation distortion SSR loci distributed throughout the ‘Katy’ LG3, using data from subsets of the outcrossing populations ‘H×K’, ‘G×K’ and ‘C×K’ carrying the PPM.

Locus PeachMba Populationb Seg.Typec -c -d -e -g -n -p Total ?2 (P-value)d
MA066a 02,40 H×K−/G×K <efxeg>/<nnxnp> 5 6 11 14 36 0,44 (0,50)
ssrPaCITA23 02,70 H×K/G×K <efxeg> 16 20 36 0,44 (0,50)
UDAp468 04,85 H×K/C×K <efxeg> 21 14 35 1,40 (0,24)
BPPCT039 05,80 H×K/C×K <abxcd>/<efxeg> 3 8 13 9 33 2,46 (0,12)
PGS3_03 16,41 H×K/C×K <efxeg> 33 2 35 27,46 (1.6e−7)e
PGS3_12 17,38 All three <efxeg>/<nnxnp> 23 1 34 2 60 48,60 (0,00)e
PGS3_15 17,71 C×K <efxeg> 24 0 24 24,00 (9.6e−7)
PGS3_22 18,49 All three <efxeg>/<nnxnp> 36 0 24 0 60 60,00 (0,00)e
PGS3_23 18,61 All three <efxeg>/<nnxnp> 36 0 24 0 60 60,00 (0,00)e
PGS3_28 19,14 All three <nnxnp> 60 0 60 60,00 (0,00)e
PGS3_32 19,60 All three <efxeg>/<nnxnp> 11 0 48 1 60 56,07 (0,00)e
PGS3_33 19,66 All three <abxcd>/<efxeg> 0 11 48 1 60 56,07 (0,00)e
AMPA119 20,00 All three <efxeg> 59 1 60 56,07 (0,00)e
EPPCU7190 19,78 All three <efxeg> 59 1 60 56,07 (0,00)e
CPDCT027 21,67 All three <abxcd>/<nnxnp> 31 3 19 5 58 30,41 (3e−8)e
EPPCU0532 22,00 H×K/G×K <efxeg>/<nnxnp> 11 0 21 3 35 24,03 (9.5e−7)e
a

Marker position (Mb) within the peach genome scaffold_3 which size estimated by IPGI was 22.02 Mb.

b

S-genotypes of the selected seedlings were: S 1 S 1 and S 1 S 4 in ‘H×K’; S 2 S 2 and S C S 2 in ‘C×K’; S 1 S 1, S 1 S 2 and S 2 S 2 in ‘G×K’.

c

Segregation type as per JoinMap 3.0.

d

Chi-square test was performed for the expected ratios 1∶2:1 (<abxab>) (a) and 1∶1 (<nn×np>/<ef×eg>/<ab×cd>) (b).

e

Observed ratios differ significantly from expected at P<0.05 for 2 (a) or 1 degrees of freedom (b).