Table 1.
Distribution of different categories of DNA, based on sequence analysis of subclones from test (SYCP3) and control (no antibody) ChIP experiments of male
| DNA type | Test no. of base pairs (%) | Control no. of base pairs (%) | Mouse genome ave. (%) |
|---|---|---|---|
|
SINEs |
9483 (13.4) |
5065 (9.2) |
8.2 |
|
LINEs |
13023 (18.3) |
10832 (19.6) |
19.2 |
|
LTRs |
10422 (14.7) |
9959 (18.0) |
9.9 |
|
DNA Elements |
533 (0.8) |
360 (0.6) |
0.9 |
|
Unclassified/other repeats |
205 (0.3) |
58 (0.1) |
0.4 |
|
Unique sequence |
37325 (52.6) |
29114 (52.6) |
61.4 |
| Total Bp Sequenced | 70991 (100.1) | 55388 (100.1) | 100.0 |