Table 3.
Optimized parameter values
Optimized Parameter Value withWidth Of 95% Confidence Interval Indicated Between Parentheses (%) |
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Parameter | Unit | Description | Initial Condition | Model conf. i | Model conf. ii | Model conf. iii |
kATP Hydr (0 Hz) | s−1 | ATPase rate constant 0 Hz | 0.001a | 0.0020 (±3.8%) | 0.0020 (±5.1%) | 0.0017 (±2.0%) |
kATP_Hydr (5 Hz) | s−1 | ATPase rate constant 5 Hz | 0.01a | 0.084 (±6.4%) | 0.091 (±6.8%) | 0.068 (±3.1%) |
kATP_Hydr (10 Hz) | s−1 | ATPase rate constant 10 Hz | 0.01a | 0.072 (±5.9%) | 0.077 (±6.4%) | 0.056 (±3.1%) |
kATP_Hydr (40 Hz) | s−1 | ATPase rate constant 40 Hz | 0.01a | 0.060 (±5.3%) | 0.065 (±6.0%) | 0.049 (±2.8%) |
kATP_Hydr (80 Hz) | s−1 | ATPase rate constant 80 Hz | 0.01a | 0.047 (±9.8%) | 0.050 (±10.2%) | 0.041 (±3.9%) |
BuffCapFixed | M | Fixed buffer cellular proton buffer capacity | 0.0142b | 0.068 (±8.6%) | 0.073 (±10.8%) | 0.050 (±5.5%) |
VmaxPFK | mM/s | Vmax PFK | 0.93b | 8.76 (±26.0%) | 10.43 (±43.8%) | 10.25 (±11.9%) |
KAMP | mM | PFK deinhibition constant AMP | 0.002c | 0.0017 (±29.1%) | 0.014 (±5.2%) | 0.046 (±23.3%) |
KADP | mM | PFK deinhibition constant ADP | 0.030c | 0.31 (±49.3%) | 0.16 (26.6±%) | 0.24 (±7.2%) |
kdeinhib_Act | unitless | PFK deinhibition constant activated PFK | 1c | — | 8.72 * 106 (±2.45 * 105%) | — |
KAMPact | mM | PFK deinhibition constant AMP activated PFK | 0.002c | — | — | 2.23 * 10−5 (±6.0%) |
KADPact | mM | PFK deinhibition constant ADP activated PFK | 0.030c | — | — | 0.020 (±28.3%) |
kon | μM−2/s | PFK, calcium-calmodulin binding constant | 1 * 104–1 * 109 | — | 1.26 * 106 (±2.00 * 103%) | 6.08 * 105 (±19.3%) |
koff | s−1 | PFK, calcium-calmodulin binding constant | 1 * 101–1 * 104 | — | 4.75 * 103 (±23.3%) | 106 (±13.3%) |
kATP_Hydr (1 Hz) | s−1 | ATPase rate constant 5 Hz | 0.005a,d | 0.036 (5.0%) | 0.038 (15.6%) | 0.032 (5.0%) |
kATP_Hydr (40 Hz, 20 pulses) | s−1 | ATPase rate constant 40 Hz 20 pulses | 0.02a,d | 0.050 (20.0%) | 0.042 (35.3%) | 0.072 (11.6%) |