Table 1. Sequence data for the fungal isolates.
Isolate | Number of reads | Aligned (%a) | Bp covered in %b | Mean coverage (×) |
87087/8 | 8085500 | 5663815 (70) | 91.8 | 6.5 |
90231/2 | 7709202 | 5812383 (75.4) | 91.7 | 6.7 |
87068/2 | 4881680 | 3350754 (68.6) | 87.7 | 4.0 |
Rb_28-20 | 5745116 | 3869565 (67.4) | 88.8 | 4.6 |
W_15c | 15259254 | 10853302 (71.1) | 94 | 12.5 |
V5:91_C4 | 6538484 | 4670833 (71.4) | 91 | 5.4 |
91202/2 | 8785361 | 6411227 (73) | 91.7 | 7.4 |
92153/1 | 4665945 | 3205708 (68.7) | 87 | 3.8 |
92182/1 | 8387492 | 4033923 (48.1) | 86.3 | 4.7 |
93030/1 | 5324851 | 3675732 (69) | 88.3 | 4.3 |
Fr_38-9 | 5736328 | 3943813 (68.8) | 89.1 | 4.7 |
AR_18 | 3984153 | 2754913 (69.1) | 86.4 | 3.3 |
Sä_34-1 | 7428905 | 5504802 (74.1) | 91 | 6.3 |
V12:56_C4 | 4820594 | 3162468 (65.6) | 86.7 | 3.7 |
MJT155_b-4 | 8306930 | 6038861 (72.7) | 91.5 | 6.9 |
V3:47_C4 | 3219690 | 2181339 (67.7) | 80.2 | 2.6 |
Rb_30-3 | 3889667 | 2780017 (71.5) | 86.8 | 3.3 |
90211/2c | 14675726 | 10950439 (74.6) | 93.9 | 12.6 |
93014/1 | 8724653 | 6316731 (72.4) | 91.9 | 7.3 |
FW2-2 | 4454412 | 3123319 (70.1) | 86.4 | 3.7 |
Sä_16-4c | 12338577 | 9018462 (73.1) | 93.9 | 10.4 |
L12-1 | 5661520 | 3239493 (57.2) | 85.4 | 3.8 |
V13:53_C2 | 4385406 | 3034864 (69.2) | 87.8 | 3.6 |
Percent aligned compared with total number of reads.
Coverage on reference sequence, Sä16-4, 90211-2 and W15 combined.
Paired-end sequenced isolates.