. 2012 Oct 27;30(2):435–447. doi: 10.1093/molbev/mss246

Table 2.

Diversity Measured by π, Θ (expressed per bp), and the Number of Observed Polymorphic Sites in Different Categories.

Locus	π_hal	π_lyr	Θ_hal	Θ_lyr	S_f-hal	S_f-lyr	S_x-hal	S_x-lyr	S_{x-hal f-lyr}	S_{x-lyr f-hal}	S_s
At4g21170	0.0451	0.0201	0.0272	0.0164	1	1	11	5	2	0	4
At4g21200	0.007	0.0106	0.0055	0.0092	1	0	2	3	0	0	0
At4g21230	0.0312	0.0073	0.0228	0.0166	0	8	10	7	2	1	0
At4g21323	0.0396	0.0092	0.0218	0.0139	2	2	10	7	2	0	0
B80	0.0941^***	0.0937^***	0.0574^***	0.0714^***	0	0	13^*	23^***	2	0	31^***
ARK3	0.0812^*	0.0614^*	0.0525^*	0.0634^**	0	0	9	10^*	1	3^*	5^*
B120	0.0459^*	0.0620^**	0.0386^**	0.0331^*	0	0	12^*	7	0	1	9^**
B160	0.0362	0.014	0.0305^*	0.0127	0	0	19^**	6	2	0	0
At4g21440	0.0118	0.0527	0.0152	0.0399	1	1	6	12	0	3	1
At4g21480	0.1016^***	0.0153	0.0822^***	0.0298^***	0	0	33^***	3	1	0	12^***
At4g21550	0.0129	0.0067	0.0089	0.0074	0	0	4	3	0	0	0
At4g21620	0.017	0.0248	0.0098	0.0138	1	0	3	3	0	1	0

Note.—The observed values were tested against neutral expectation by obtaining confidence intervals through 10,000 coalescent simulations under the best fitted demographic model.

*P value: 0.01–0.05.

**P value: 0.001–0.01.

***P value < 0.001.