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. 2012 Nov 26;288(3):1814–1827. doi: 10.1074/jbc.M112.430785

TABLE 2.

Energies and structural statistics for the family of 20 lowest energy structures with highest overall MolProbity score

Energies (kcal/mol)
    Overall −602.9 ± 12.56
    Bonds 2.83 ± 0.243
    Angles 13.1 ± 1.23
    Improper 3.45 ± 0.553
    van der Waals −78.1 ± 4.52
    NOE 8.05 ± 0.781
    cDih 0.351 ± 0.233
    Dihedral 103.6 ± 2.959
    Electrostatic −656.2 ± 15.43

MolProbity statistics
    Clashes (>0.4 Å/1000 atoms) 6.76 ± 3.76
    Poor rotamers 0.278 ± 1.24
    Ramachandran outliers 0.00 ± 0.00%
    Ramachandran favored 100.00 ± 0.00%
    MolProbity score 1.32 ± 0.266
    MolProbity score percentilea 97.2 ± 2.43
    Residues with bad bonds 0.00 ± 0.00
    Residues with bad angles 0.00 ± 0.00

Atomic r.m.s.d.
    Mean global backbone 0.34 ± 0.14 Å
    Mean global heavy 1.54 ± 0.28 Å

Distance restraints
    Intraresidue (ij = 0) 0
    Sequential (|ij| = 1) 72
    Medium range (|ij| <5) 36
    Long range (|ij| >) 11
    Hydrogen bonds 12 (for 6 H-bonds)
    Total 131

Dihedral angle restraints
    φ 16
    χ1 8
    Total 24

Violations from experimental restraints
    Total NOE violations exceeding 0.2 Å 0
    Total dihedral violations exceeding 3.0° 3 (highest 3.33)

a 100th percentile is the best among structures of comparable resolution; 0th percentile is the worst.