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. Author manuscript; available in PMC: 2013 Jan 18.
Published in final edited form as: Curr Genomics. 2005;6:501–513. doi: 10.2174/138920205775067675

Table 4.

Supermodules and GO Functions

GO Molecular Function A Adj p-value B Adj p-value C Adj p-value D Adj p-value
Actin binding 2.93E-04 1.16E-04
Antiviral response protein activity 2.85E-05 4.72E-05 4.14E-05
Apoptosis inhibitor activity 1.18E-04 9.58E-05
Calmodulin binding 2.00E-04 1.02E-04
Chemokine activity 5.51E-05 9.11E-05 7.48E-05
GTPase inhibitor activity 2.54E-05 6.78E-06
Helicase activity 5.72E-05
Microtubule binding 4.30E-05 2.82E-05
Protein binding 0.00170446 2.58E-03
Ras GTPase activator activity 1.27E-05 3.39E-06
Rho GTPase activator activity 5.17E-05
Structural constituent of ribosome 9.72E-05
Transcription co-activator activity 9.39E-04
Transcription factor activity 0.0039627 0.00771924

The table summarizes GeneOntology molecular function annotation for differentially expressed genes containing a supermodule in the 5’ upstream region. The ■ symbol denotes the existence of annotation for a supermodule regulated gene with a molecular function, and the □ symbol shows the absence of annotation for a regulated gene with that function. The adjusted p-values associated to the occurrence frequencies for each category/module are displayed on the right side adjacent of the corresponding module