Table 1.
Background information of P gene sequences used in this study
| Genus/isolates | Host | Origin | Year | GenBank acc. no. | Genus/isolates | Host | Origin | Year | GenBank acc. no. |
|---|---|---|---|---|---|---|---|---|---|
|
AH8 |
Dog |
AH |
2005 |
HM582562 |
SH9 |
Dog |
SH |
2004 |
HM582564 |
|
AH12 |
Dog |
AH |
2005 |
HM582567 |
SH15 |
Dog |
SH |
2004 |
HM582555 |
|
GX0801 |
Dog |
GX |
2008 |
HM582588 |
SH16 |
Dog |
SH |
2004 |
HM582584 |
|
GX0802 |
Dog |
GX |
2008 |
HM582589 |
SH17 |
Dog |
SH |
2004 |
HM582554 |
|
GX0803 |
Dog |
GX |
2008 |
HM582590 |
SH19 |
Dog |
SH |
2004 |
HM582550 |
|
GX0804 |
Dog |
GX |
2008 |
HM582591 |
SH20 |
Dog |
SH |
2004 |
HM582532 |
|
GX0805 |
Dog |
GX |
2008 |
HM582592 |
SH24 |
Dog |
SH |
2003 |
HM582536 |
|
GX0806 |
Dog |
GX |
2008 |
HM582593 |
SH25 |
Dog |
SH |
2003 |
HM582553 |
|
GX0807 |
Dog |
GX |
2008 |
HM582594 |
SH27 |
Dog |
SH |
2003 |
HM582529 |
|
GX0809 |
Dog |
GX |
2008 |
HM582595 |
SH28 |
Dog |
SH |
2003 |
HM582524 |
|
GX1 |
Dog |
GX |
2006 |
HM582521 |
SH29 |
Dog |
SH |
2003 |
HM582548 |
|
GX2 |
Dog |
GX |
2006 |
HM582546 |
SH30 |
Dog |
SH |
2003 |
HM582549 |
|
GX3 |
Dog |
GX |
2006 |
HM582525 |
SH31 |
Dog |
SH |
2003 |
HM582556 |
|
GX5 |
Dog |
GX |
2006 |
HM582571 |
SH32 |
Dog |
SH |
2003 |
HM582561 |
|
GX6 |
Dog |
GX |
2006 |
HM582581 |
D03 |
Dog |
ZJ |
2008 |
HM582568 |
|
GX7 |
Dog |
GX |
2006 |
HM582526 |
D05 |
Dog |
ZJ |
2008 |
HM582569 |
|
GX8 |
Dog |
GX |
2005 |
HM582522 |
D06 |
Dog |
ZJ |
2008 |
HM582573 |
|
GX9 |
Dog |
GX |
2006 |
HM582535 |
D07 |
Dog |
ZJ |
2008 |
HM582570 |
|
GX10 |
Dog |
GX |
2005 |
HM582523 |
D10 |
Dog |
ZJ |
2008 |
HM582586 |
|
GX16 |
Dog |
GX |
2005 |
HM582538 |
F03 |
CFB |
ZJ |
2008 |
HM582587 |
|
GX18 |
Dog |
GX |
2006 |
HM582527 |
CGX0521 |
Dog |
GX |
2005 |
EU004759 |
|
GX19 |
Dog |
GX |
2006 |
HM582543 |
CGX0603 |
Dog |
GX |
2006 |
EU004755 |
|
GX24 |
Dog |
GX |
2005 |
HM582547 |
CGX0614 |
Dog |
GX |
2006 |
EU004758 |
|
GX26 |
Dog |
GX |
2006 |
HM582528 |
CHdg18 |
Dog |
GX |
2007 |
AB458796 |
|
GZ1 |
Dog |
GZ |
2005 |
HM582580 |
GX4 |
Dog |
GX |
1994 |
GU358653 |
|
GZ3 |
Dog |
GZ |
2005 |
HM582544 |
HN10 |
Human |
HN |
2006 |
EU643590 |
|
GZ6 |
Dog |
GZ |
2005 |
HM582579 |
CHN0635 |
Human |
HN |
2006 |
EU004777 |
|
GZ8 |
Dog |
GZ |
2005 |
HM582531 |
CJS0523 |
Dog |
JS |
2005 |
EU004782 |
|
GZ9 |
Dog |
GZ |
2005 |
HM582540 |
JX08-45 |
CFB |
JX |
2008 |
GU647092 |
|
GZ10 |
Dog |
GZ |
2005 |
HM582541 |
NeiMeng925 |
Dog |
NM |
2008 |
FJ415313 |
|
GZ11 |
Dog |
GZ |
2005 |
HM582562 |
SH06 |
Dog |
SH |
2006 |
GU345748 |
|
GZ12 |
Dog |
GZ |
2005 |
HM582545 |
SH26 |
Dog |
SH |
2003 |
HM582583 |
|
GZ13 |
Dog |
GZ |
2005 |
HM582537 |
D01 |
Dog |
ZJ |
2008 |
FJ712193 |
|
GZ14 |
Dog |
GZ |
2005 |
HM582551 |
D02 |
Dog |
ZJ |
2008 |
FJ712194 |
|
GZ15 |
Dog |
GZ |
2005 |
HM582552 |
D04 |
Dog |
ZJ |
2008 |
FJ032321 |
|
GZ16 |
Dog |
GZ |
2005 |
HM582534 |
D08 |
Dog |
ZJ |
2008 |
FJ032322 |
|
GZ17 |
Dog |
GZ |
2005 |
HM582530 |
F02 |
CFB |
ZJ |
2008 |
FJ712195 |
|
GZ21 |
Dog |
GZ |
2008 |
HM582572 |
8743THA |
Human |
Thailand |
1983 |
EU293121 |
|
HN4 |
Dog |
HuN |
2005 |
HM582519 |
8764THA |
Human |
Thailand |
1983 |
EU293111 |
|
HN27 |
Dog |
HuN |
2005 |
HM582582 |
INRV |
Human |
India |
2005 |
AY956319 |
|
HN29 |
Dog |
HuN |
2005 |
HM582520 |
NNV-RAB-H |
Human |
India |
2006 |
EF437215 |
|
HN30 |
Dog |
HuN |
2005 |
HM582542 |
CVS |
Challenge virus standard |
|
|
X55727 |
|
JS29 |
Dog |
JS |
2006 |
HM582563 |
aG |
Vaccine st rain |
China |
|
DQ646875 |
|
JS34 |
Dog |
JS |
2006 |
HM582565 |
CTN |
Vaccine st rain |
China |
|
FJ959397 |
|
SD1 |
Dog |
SD |
2008 |
HM582557 |
PV |
Vaccine st rain |
France |
|
M13215 |
|
SD7 |
Dog |
SD |
2007 |
HM582559 |
SADB19 |
Vaccine st rain |
USA |
|
M31046 |
|
SD8 |
Dog |
SD |
2007 |
HM582558 |
Ni-CE |
Vaccine st rain |
Japan |
|
AB128149 |
|
SD10 |
Dog |
SD |
2007 |
HM582533 |
RC-HL |
Vaccine st rain |
Japan |
|
AB009663 |
|
SD11 |
Dog |
SD |
2007 |
HM582575 |
Flury-HEP |
Vaccine st rain |
USA |
|
GU565704 |
|
SD12 |
Dog |
SD |
2007 |
HM582574 |
8619NGA |
Bat |
Nigeria |
1956 |
EU293110 |
|
SD13 |
Dog |
SD |
2007 |
HM582576 |
MOKV |
Cat |
Zimbabwe |
1981 |
NC006429 |
|
SD14 |
Dog |
SD |
2006 |
HM582577 |
86132SA |
Human |
South Africa |
1971 |
EU293119 |
|
SD23 |
Dog |
SD |
2008 |
HM582578 |
8918FRA |
Bat |
France |
1989 |
EU293112 |
|
SH1 |
Dog |
SH |
2005 |
HM582585 |
9018HOL |
Bat |
Netherlands |
1986 |
EU293114 |
|
SH5 |
Dog |
SH |
2005 |
HM582566 |
ABLV |
Bat |
Aust ralia |
1996 |
NC003243 |
| SH7 | Dog | SH | 2004 | HM582560 | WCBV | Bat | Russia | 2002 | EF614258 |
Note: New sequences in this study are labeled Bold and italic; AH, GX, GZ, HuN, JS, JX, NM, SD, SH, ZJ, indicate Anhui, Guangxi, Guizhou, Hunan, Jiangsu, Jiangxi, Inner Mongolia, Shandong, Shanghai, Zhejiang provinces of China, respectively; CFB: Chinese Ferret Badgers.