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. Author manuscript; available in PMC: 2013 Sep 11.
Published in final edited form as: J Chem Theory Comput. 2012 Jul 18;8(9):3257–3273. doi: 10.1021/ct300400x

Figure 2.

Figure 2

RMS Differences in relative energies between MM and QM potential energy surfaces. RMS Differences were calculated for relative energies less than 12.0 kcal/mol above the global minimum for the three 1D or 2D surfaces. Higher-energy cutoffs of 20.0 kcal/mol for Arg and Lys or 25.0 kcal/mol for Asp, Glu and Hsp were used for the charged amino acids.