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. 2012 Dec 4;41(2):727–737. doi: 10.1093/nar/gks1187

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© The Author(s) 2012. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com.

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Figure 3. — (a) Vertical axis represents the log scores of predicted miRNAs obtained from miRNA prediction algorithm. The horizontal axis lists predicted miRNAs in descending order of score. Green lines show the predicted miRNAs that are known from miRBase. The red lines show the predicted miRNAs not listed in miRBase (i.e. novel miRNAs). The vertical axis is log scale, because the score difference across predicted miRNAs is huge. Since miRanalyzer, miRTRAP and MIReNA do not provide scores, the vertical axes represent the number of reads in the predicted miRNA. The number of predicted miRNAs shown in the figure is reduced to match the other algorithms. (b) Vertical axis represents the log fold changes after anti-dicer induced. The horizontal axis lists predicted miRNAs in descending order of folder changes.