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. 2012 Nov 28;22(4):832–841. doi: 10.1093/hmg/dds491

Table 2.

Estimated proportion of variance on the liability scales explained by all SNPs and partitioned by SNP MAF

MAF ED
 AD
 MS
No. of SNPs Inline graphic (SE) No. of SNPs Inline graphic (SE) No. of SNPs Inline graphic (SE)
<0.1 83034 0.03 (0.03) 83002 0.08 (0.02) 40360 0.03 (0.02)
0.1–0.2 118571 0.03 (0.04) 121780 0.00 (0.03) 70550 0.08 (0.03)
0.2–0.3 102261 0.07 (0.04) 104937 0.06 (0.03) 63876 0.07 (0.03)
0.3–0.4 94183 0.08 (0.03) 96610 0.08 (0.03) 60243 0.09 (0.03)
0.4–0.5 90483 0.05 (0.03) 93428 0.02 (0.02) 58445 0.03 (0.02)
Total 488532 0.25 499757 0.25 293474 0.30