Table 2.
ID converter tools, data sources and availability
| Name | Data Sources | Webpage |
|---|---|---|
| DAVID |
GenBank, RefSeq, KEGG, OMIM, UniGene |
http://david.abcc.ncifcrf.gov/ |
| Babelomics |
Go, KEGG, Ensembl and others |
http://babelomics.bioinfo.cipf.es/ |
| g:Convert |
GO, KEGG, Ensembl, TRANSFAC, Reactome |
http://biit.cs.ut.ee/gprofiler/ |
| HMS and IC |
Ensembl, GO, KEGG and others |
http://biodb.jp/ |
| Synergizer |
Ensembl, NCBI, RGD, SGD, KEGG, WormBase and EcoCyc |
http://llama.mshri.on.ca/synergizer/translate/ |
| Clone/Gene ID Converter |
Ensembl, NCBI, Pubmed, UCSC, KEGG, Reactome |
http://idconverter.bioinfo.cnio.es/ |
| MADGene |
GEO, UniGene, Entrez and others |
http://www.madtools.org/ |
| GATExplorer |
Ensembl, Affymetrix®; |
http://bioinfow.dep.usal.es/xgate/principal.php |
| NetAffx™ |
NCBI, GO, KEGG and others |
http://www.affymetrix.com/analysis/netaffx/ |
| PLANdbAffy |
Affymetrix®;, UCSC, NCBI |
http://affymetrix2.bioinf.fbb.msu.ru/ |
| probeMatchDB |
UniGene, HomoloGene |
http://brainarray.mbni.med.umich.edu/Brainarray/ |
| Uniprot |
GenBank, RefSeq, GO and others |
http://www.uniprot.org/ |
| Onto-Translate |
Ensembl, GO, KEGG and others |
http://vortex.cs.wayne.edu/ |
| AliasServer |
Ensembl, EMBL, NCBI, SGD and others |
http://cbi.labri.fr/outils/alias/ |
| MatchMiner |
Affymetrix®;, UCSC, UniGene, Entrez, OMIM |
http://discover.nci.nih.gov/matchminer/index.jsp |
| GeneMerge |
GO, KEGG |
http://genemerge.cbcb.umd.edu/ |
| BioMart |
NCBI, GO, KEGG and others |
http://www.biomart.org/ |
| BridgeDb |
Ensembl and others |
http://www.bridgedb.org/ |
| AbsIDconvert | UCSC, NCBI, Ensembl, Agilent, Affymetrix®; and others | http://bioinformatics.louisville.edu/abid/ |