Table 3.
Run time (sec.) to convert 1,000 IDs from one type to another using web–based AbsIDconvert
| |
Rat230_2 |
Cgh105a |
RefSeq |
EnsTrans |
Entrez gene |
GeneSymbol |
EST seq |
All |
|---|---|---|---|---|---|---|---|---|
| (231,971) | (97,973) | (160,644) | (349,445) | (30,972) | (30,972) | (3,918,403) | ||
| Affymetrix Rat230_2 |
5.6 |
3.2 |
4.1 |
7.6 |
3.2 |
3.3 |
33 |
47.6 |
| Agilent Cgh105a |
5.1 |
3.9 |
2.5 |
2.7 |
2.92 |
3.05 |
31.3 |
55.6 |
| RefSeq |
4.5 |
3.1 |
3.6 |
3.6 |
2.3 |
2.2 |
31.9 |
34.5 |
| Ensembl transcript |
2.9 |
3.8 |
3.1 |
4 |
2.47 |
3.02 |
34.6 |
47.1 |
| Entrez gene |
2.7 |
2.9 |
2.8 |
3 |
7.5 |
7.1 |
18.4 |
35.3 |
| Gene symbol |
2.9 |
2.8 |
2.7 |
2.9 |
8.5 |
7.5 |
16.6 |
38.2 |
| EST sequences | 18.6 | 17.6 | 31 | 30.3 | 28.3 | 29.3 | 64.1 | 73.7 |