Table 4.
Entrez ID to gene symbol conversion accuracy
| Tool | totalMapped | TP | FP | FN | TN | TPR | FPR | ACC | FDR | F1_score |
|---|---|---|---|---|---|---|---|---|---|---|
| AbsIDconvert |
885 |
866 |
19 |
109 |
6 |
88.82 |
76.00 |
87.20 |
2.15 |
93.12 |
| DAVID |
853 |
790 |
63 |
146 |
1 |
84.40 |
98.44 |
79.10 |
7.39 |
88.32 |
| MADGene |
854 |
730 |
124 |
145 |
1 |
83.43 |
99.20 |
73.10 |
14.52 |
84.44 |
| HMS & IC |
724 |
723 |
1 |
270 |
6 |
72.81 |
14.29 |
72.90 |
0.14 |
84.22 |
| Onto-Translate |
823 |
722 |
101 |
176 |
1 |
80.40 |
99.02 |
72.30 |
12.27 |
83.90 |
| MatchMiner |
539 |
457 |
82 |
458 |
3 |
49.95 |
96.47 |
46.00 |
15.21 |
62.86 |
| Clone/Gene ID converter |
537 |
441 |
96 |
457 |
6 |
49.11 |
94.12 |
44.70 |
17.88 |
61.46 |
| g:Convert |
445 |
433 |
12 |
549 |
6 |
44.09 |
66.67 |
43.90 |
2.70 |
60.69 |
| Synergizer |
445 |
433 |
12 |
549 |
6 |
44.09 |
66.67 |
43.90 |
2.70 |
60.69 |
| Babelomics | 486 | 421 | 65 | 508 | 6 | 45.32 | 91.55 | 42.70 | 13.37 | 59.51 |