Table 5.
Entrez ID to RefSeq ID conversion accuracy
| Tool | Total Mapped | TP | FP | FN | TN | TPR | FPR | ACC | FDR | F1_score |
|---|---|---|---|---|---|---|---|---|---|---|
| AbsIDconvert |
586 |
362 |
224 |
20 |
394 |
94.76 |
36.25 |
75.60 |
38.23 |
74.79 |
| MADGene |
551 |
335 |
216 |
49 |
400 |
87.24 |
35.06 |
73.50 |
39.20 |
71.66 |
| Onto-Translate |
501 |
291 |
210 |
99 |
400 |
74.62 |
34.43 |
69.10 |
41.92 |
65.32 |
| DAVID |
549 |
311 |
238 |
72 |
379 |
81.20 |
38.57 |
69.00 |
43.35 |
66.74 |
| Synergizer |
482 |
278 |
204 |
121 |
397 |
69.67 |
33.94 |
67.50 |
42.32 |
63.11 |
| g:Convert |
482 |
278 |
204 |
121 |
397 |
69.67 |
33.94 |
67.50 |
42.32 |
63.11 |
| MatchMiner |
474 |
268 |
206 |
126 |
400 |
68.02 |
33.99 |
66.80 |
43.46 |
61.75 |
| Babelomics |
501 |
267 |
234 |
128 |
371 |
67.59 |
38.68 |
63.80 |
46.71 |
59.60 |
| Clone/Gene ID converter |
421 |
219 |
202 |
195 |
384 |
52.90 |
34.47 |
60.30 |
47.98 |
52.46 |
| HMS & ID | 461 | 227 | 430 | 181 | 162 | 55.64 | 72.64 | 38.90 | 65.45 | 42.63 |