Table 7.

Results of Mixed Replica search vs. REMC – Mixed MR

Optimized →	MixedMR**(int=0.2)						MixedMR**(int=0.05)
Algorithm*	MixedMR	(t)	MRmin∘	MR∘			MixedMR	(t)	MRmin∘	MR∘
	Bulk maize data set (275)
REMC	0.476	23.6s	0.395	0.557			0.582	4.7s	0.534	0.629
MixRep	0.475	23.9s	0.393	0.557			0.582	5.8s	0.534	0.630
Original			0.116	0.440					0.116	0.440
	Accession maize data set (521)
REMC	0.608	51.0s	0.526	0.690			0.678	56.0s	0.638	0.717
MixRep	0.618	6.9s	0.555	0.682			0.676	31.5s	0.635	0.717
Original			0.294	0.630					0.294	0.630
	Flax data set (708)
REMC	0.422	39.5s	0.337	0.508			0.487	20.3s	0.446	0.529
MixRep	0.440	19.0s	0.378	0.502			0.486	44.5s	0.445	0.527
Original			0.000	0.468					0.000	0.468
	Pea data set (1283)
REMC	0.396	02m27s	0.209	0.583			0.510	26.1s	0.397	0.622
MixRep	0.454	02m01s	0.324	0.583			0.520	6.6s	0.429	0.612
Original			0.000	0.509					0.000	0.509
	Large pea data set▾ (4429)
REMC	0.278	40m29s	0.000	0.556			0.313	02m03s	0.000	0.626
MixRep	0.405	01h40m	0.230	0.580			0.487	02m48s	0.361	0.612
Original			0.000	0.464					0.000	0.464

^*For each combination of algorithm, dataset and evaluation measure, 20 independent runs were performed from which averaged results are reported. By default runs were limited by a runtime of 60 seconds, with some exceptions. For the small pea dataset with an intensity of 20%, a runtime limit of 150 seconds was applied. For the large pea dataset runtime limits were set to 10 minutes for the 5% intensity and 2 hours for the 20% intensity.

^**Results shown are those of a pseudo-index containing both minimum and mean MR distance, with equal weight = 0.5.

^∘Components of mixed MR measure.

^▾These results were computed on the helios server.