Table 4.
Expression values of genes involved in starch metabolism
| Gene ID | Name | DSM annotation | N402 | B36 | Fold-change B36/N402 | P | FDR |
|---|---|---|---|---|---|---|---|
| An04g06910 |
amyR |
transcription factor of starch utilization amyR - Aspergillus niger |
1176 |
748 |
0.64 |
1.06E-06 |
3.06E-05 |
| An11g03340 |
aamA |
acid alpha-amylase - Aspergillus niger |
3782 |
858 |
0.23 |
1.24E-09 |
1.48E-07 |
| An04g06920 |
agdA |
extracellular alpha-glucosidase aglU - Aspergillus niger |
12052 |
7257 |
0.60 |
7.55E-08 |
4.07E-06 |
| An01g10930 |
agdB |
strong similarity to enzyme with sugar transferase activity from patent JP11009276-A - Acremonium sp. |
5808 |
2634 |
0.45 |
2.27E-09 |
2.40E-07 |
| An03g06550 |
glaA |
glucan 1,4-alpha-glucosidase glaA - Aspergillus niger |
21376 |
26346 |
1.23* |
3.94E-04 |
3.80E-03 |
| An04g06930 |
amyC |
strong similarity to extracellular alpha-amylase amyA/amyB - Aspergillus niger |
529 |
288 |
0.54 |
7.68E-08 |
4.13E-06 |
| An04g06920 |
aglU |
extracellular alpha-glucosidase aglU - Aspergillus niger |
12052 |
7257 |
0.60 |
7.55E-08 |
4.07E-06 |
| An09g03100 | amyA | strong similarity to alpha-amylase precursor amy - Aspergillus niger | 359 | 115 | 0.32 | 7.34E-08 | 3.99E-06 |
*Fold difference in glaA is under-estimated due to the saturation of array signals. Transcript level of glaA in B36 was about 7-fold higher than N402 based on qPCR results.