TABLE 1.
Characteristics of B. napus cruciferins and their α and β polypeptide chains
No AA αa | No AA βa | No AA α+βa | MM cal α+βb | MM cal αb | MM app αc | MM cal βb | MM app βc | pI cal αb | pI app αc | pI cal βb | pI app βc | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Cru 1 | 296 | 190 | 486 | 54.1 | 32.9 | 31.0–36.0 | 21.2 | 19.0–21.0 | 7.17 | 6.8–7.8 | 6.94 | 8.3–9.5 |
BnC1 | 254 | 190 | 477 | 51.4 | 30.6 | 27.0–36.0 | 20.8 | 19.0–21.0 | 6.78 | 6.8–7.8 | 6.16 | 5.9–7.0 |
BnC2 | 283 | 190 | 473 | 51.8 | 30.8 | 31.0–32.0 | 21.0 | 19.0–21.0 | 7.95 | 7.1–7.8 | 8.6 | 8.3–8.9 |
Cru 2/3 | 275 | 190 | 465 | 51.3 | 30.5 | 27.0–32.0 | 20.8 | 19.0–21.0 | 6.78 | 7.1 | 6.16 | 5.9–7.0 |
Cru 4 | 254 | 189 | 443 | 48.9 | 28.1 | 27.0–32.0 | 20.9 | 19.0–21.0 | 6.66 | 6.7–7.0 | 8.6 | 8.3–9.5 |
a Number of amino acids, excluding the signal peptide, derived from the corresponding UniProt database entry.
b Calculated isoelectric points and calculated molecular masses, excluding the signal peptide, using the ExPASy MM/pI tool.
c Apparent isoelectric points and molecular masses upon analyses by two-dimensional IEF/SDS PAGE (Fig. 5).