Skip to main content
. 2013 Jan 25;8(1):e54654. doi: 10.1371/journal.pone.0054654

Table 4. Significant genes falling in the GO fine category of “defence response”.

Gene set Gene ID Sub set 1B FC 2B FC 3B FC 5B FC Description
101 Pa At1g09340 96 - - - 5.4 CRB CHLOROPLAST RNA BINDING protein, putative
At3g04720 96 - - - 5.1 PR4 PATHOGENESIS-RELATED 4
At3g11010 96 - - - 3.0 RLP34 Receptor like protein 34 (LRR-containing N-terminal domain, type 2)
At5g47220 96 - - - 2.9 ATERF-2 ETHYLENE RESPONSE FACTOR 2
At4g23670 96 - - - 2.5 Major latex protein-related
At2g31880* 96 - - - 1.7 LRR transmembrane protein kinase, putative
153 avr At1g24020 93 1.4 2.2 −1.2 - MLP-like protein 423
At3g28930 58 1.0 1.6 −1.3 - AIG2 AVRRPT2-INDUCED GENE 2
At1g63870* 58 −1.0 1.5 −1.1 - Disease resistance protein (TIR-NBS-LRR class), putative
At5g06320 58 −1.2 −1.0 1.5 - NHL3 NDR1/HIN1-like 3
At3g27850 93 −1.4 3.1 1.0 - RPL12-C RIBOSOMAL PROTEIN
318 Pst At1g24020 93 3.9 −1.1 −1.0 - MLP-like protein 423
At1g79210 220 2.5 −1.0 1.1 - 20S proteasome alpha subunit B
At3g21220 220 2.1 −1.2 1.1 - ATMKK5 MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5
At1g52660* 220 1.9 −1.4 1.4 - Disease resistance protein, putative (NB-ARC, LRR type 3)
At4g23810 220 1.9 −1.2 −1.0 - WRKY53 transcription factor
At2g15220 220 1.5 1.2 −1.0 - Plant basic secretory protein (BSP) family protein
At3g27850 93 1.5 −3.3 −1.5 - RPL12-C RIBOSOMAL PROTEIN
At5g53890* 220 1.0 1.9 1.3 - LRR transmembrane protein kinase, putative
At1g19610 220 −0.9 1.5 1.2 - LCR78/PDF1.4 Low-MW-cysteine rich 78
At2g43530 220 −2.5 3.8 2.0 - Trypsin inhibitor, putative

FC Fold change, 1 to 5 rounds of bio-panning (1B to 5B). Predicted LRR-containing proteins are marked in bold, asterisks indicate immune-related baits tested by Muhktar et al.