Table 1.
LrgB proteins in Plantae and Stramenopila
| Kingdom | Species | Gene namea | Amino acids |
Predictable CTPb |
GenBank ID | Refs |
|---|---|---|---|---|---|---|
| Plantae | Arabidopsis thaliana | AtLrgB | 512 | Yes | GI:18398254 | [64] |
| Oryza stativa, Japonica | OsLrgB1 | 519 | Yes | GI:222618542 | [67] | |
| OsLrgB2 | 458 | No | GI:115483664 | |||
| Glycine max | GmLrgB1 | 501 | Yes | GI:356559047 | [68] | |
| GmLrgB2 | 456 | No | GI:356495970 | |||
| Physcomitrella | PpLrgB1 | 529 | Yes | GI:168038766 | [69] | |
| Patens | PpLrgB2 | 447 | No | GI:168022538 | ||
| Zea mays | ZmLrgB1 | 544 | Yes | GI:226501414 | [70] | |
| ZmLrgB2 | 542 | Yes | GI:293334459 | |||
| Vitis vinifera | VvLrgB1 | 450 | No | GI:296085918 | [71] | |
| VvLrgB2 | 434 | No | GI:225439243 | |||
| Chlamydomons reinhardtii | CrLrgB | 455 | No | GI:159472707 | [72] | |
| Stramenopila | Phaeodactylum | PtLrgB1 | 524 | Yes | GI:219118995 | [73] |
| tricorntum | PtLrgB2 | 408 | No | GI:219118464 | ||
| Thalassiosira | TpLrgB1 | 525 | Yes | GI:224008725 | [74] | |
| pseudonana | TpLrgB2 | 413 | No | GI:224005114 |
a
LrgB homologues in Plantae and Stramenopila were collected from the Genbank resource of NCBI (http://www.ncbi.nlm.gov/). Amino acid sequence alignment of LrgB domains were conducted as described by Yang et al. [64].
b
CTP (chloroplast transit peptides) were predicted using the program ChloroP [75].