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. 2012 Dec 27;6:155. doi: 10.1186/1752-0509-6-155

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Copyright ©2012 Sridharan et al.; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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(A) ShReD-based partition for the un-weighted model. (B) ShReD-based partition for the Day 12 flux-weighted model. The partition trees represent each module as a pie chart, where the size of each slice is proportional to the fraction of reactions in the module that belong to the corresponding, pre-assigned canonical group. The group assignments are indicated by color as shown in the legend. Modules referred to in the text are labeled with identification numbers. Reactions associated with each module are listed in Additional file 2.