Table 6.
Significant differentially expressed transcripts located in each of the QTL regions
| Trait | Chr. | Interval | Gene definition | RAP locus |
|---|---|---|---|---|
| RL |
3 |
RM282-RM6283 |
SUS |
Os03t0340500, Os03t0401300 |
| RDW |
3 |
RM168-RM143 |
EGase |
Os03t0736300 |
| RL |
4 |
RM5953-RM3317 |
SUS |
Os04t0249500 |
| RD |
5 |
RM3800-RM3870 |
PP2C |
Os05t0457200 |
| RDW |
5 |
RM3870-RM6972 |
PDC |
Os05t0469600, Os05t0469800 |
| RDW |
5 |
RM6972-RM274 |
PFK |
Os05t0524400 |
| RV |
6 |
RM6734-RM1163 |
RR-B |
Os06t0183100 |
| RL |
7 |
RM234-RM118 |
SnRK2 |
Os07t0622000 |
| RL, TRL, RSA, RV, RTN, RDW |
7 |
RM180-RM5436 |
CesA |
Os07t0208500, Os07t0208533, Os07t0252400 |
| RFW |
10 |
RM6100-RM3773 |
PDC |
Os10t0480900 |
| GYD, NP, NSP, HD |
7 |
RM180-RM5436 |
CesA |
Os07t0208500, Os07t0208533, Os07t0252400 |
| HD |
3 |
RM148-RM85 |
CesA |
Os03t0837100 |
| GYD | 5 | RM6972-RM274 | PFK | Os05t0524400 |