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. Author manuscript; available in PMC: 2014 Jan 22.
Published in final edited form as: Biochemistry. 2013 Jan 11;52(3):537–546. doi: 10.1021/bi301650d

Table 3.

Effect of 4′-substituents on the decarboxylation reactions of the truncated substrates EO and FEO catalyzed by yeast OMPDC at 25 °C.

Substrate 4′-Substituent Effect of 4′-Substituent ΔΔG‡ (kcal/mol)
EO CH2OPO32− + 4.2 × 108-fold a −11.7
FEO CH2OPO32− + 1.2 × 106-fold a −8.3
EO CH2OH −140-fold b +2.9
EO + HPO32− CH2OH −1.3 × 106-fold c +8.3
FEO CH3 −130-fold b +2.9
FEO + HPO32− CH3 −3000-fold c +4.7
a

Calculated from the values of kcat/Km for the decarboxylation of OMP (1.1 × 107 M−1 s−1, Ref. 7) and FOMP (1.2 × 107 M−1 s−1, Ref. 27) at pH 7.1 and I = 0.105 (NaCl) and the values of (kcat/Km)E in Table 1 for the decarboxylation of EO and FEO at pH 7.0 and I = 0.14 (NaCl).

b

Calculated from the values of (kcat/Km)E in Table 1 for the unactivated decarboxylation reactions of EO, orotidine, FEO, and 5′-dFO at pH 7.0 or pH 7.1 (for orotidine) and I = 0.14 (NaCl).

c

Calculated from the values of (kcat/Km)E·Hpi/Kd in Table 1 for the phosphite-activated decarboxylation reactions of EO, FEO, and 5′-dFO at pH 7.0 and I = 0.14 (NaCl) and the reaction of orotidine at pH 7.1 and I = 0.21 (NaCl).