Table 3.
Genes and functions of region 2
Protein | Gene name | No. of amino acids | Proposed function | Organism | Identity/ similarity (I/S) (%) | Accession number |
TERTU_2188 | TERTU_2188 | 519 | Transposase | Cellvibrio japonicus | 68/81 | YP_001983638.1 |
TERTU_2189 | TERTU_2189 | 62 | Hypothetical protein | |||
TERTU_2190 | TERTU_2190 | 68 | Hypothetical protein | Saccharophagus degradans | 49/63 | YP_526685.1 |
TERTU_2191 | TERTU_2191 | 171 | Hypothetical protein | Saccharophagus degradans | 66/78 | YP_526685.1 |
TERTU_2193 | TERTU_2193 | 234 | ACP phosphodiesterase | Idiomarina loihiensis | 86/94 | YP_155995.1 |
TERTU_2194 | TERTU_2194 | 290 | Transcription regulator LysR | Marinobacter adhaerens | 80/91 | ADP97201.1 |
TERTU_2195 | TERTU_2195 | 549 | Peptidase | Plesiocystis pacifica | 39/55 | ZP_01910797.1 |
TERTU_2198 | trtA | 196 | Acyltransferase (GNAT) | Burkholderia thailandensis | 46/69 | ZP_05587728.1 |
TERTU_2199 | trtB | 287 | Acyltransferase | Streptomyces cattleya | 47/62 | CCB76280.1 |
TERTU_2200 | trtC | 236 | Lipoprotein/enoyl CoA isomerase hydratase | Actinosynnema mirum | 43/61 | YP_003099559.1 |
TERTU_2202 | trtD | 4,539 | PKS-Hyd-KR-FkbH-ACP-KS1-DH-KR-ACP-KS2-KR-ACP-KS3 | Bacillus amyloliquefaciens | 35/50 | YP_001421792.1 |
TERTU_2203 | trtE | 4,947 | PKS-DH-ACP-KS4-KR-ACP-KS5-ACP-KS6-KR-ACP-KS7-ACP-KS8 | Clostridium cellulolyticum | 29/47 | YP_002505214.1 |
TERTU_2204 | trtF | 4,663 | PKS-KR-ACP-KS9-DH-KR-MT-ACP-KS10-ACP-KS11-ACP-TE | Paenibacillus polymyxa | 30/47 | YP_003871371 |
TERTU_2205 | trtG | 377 | Oxygenase | Dickeya dadantii | 44/64 | YP_002988660.1 |
TERTU_2206 | trtH | 268 | Thioesterase | Xenorhabdus bovienii | 31/51 | YP_003468018.1 |
TERTU_2207 | trtI | 455 | Dioxygenase | Pseudomonas fluorescens | 56/72 | AAM12912.1 |
TERTU_2208 | trtJ | 151 | Polyketide cyclase | Acidithiobacillus ferrivorans | 35/55 | ZP_08490092.1 |
TERTU_2209 | TERTU_2209 | 51 | Hypothetical | |||
TERTU_2211 | TERTU_2211 | 486 | Glycoside hydrolase | Sorangium cellulosum | 61/75 | YP_001617495.1 |
TERTU_2212 | TERTU_2212 | 378 | Transcription regulator AraC | Saccharophagus degradans | 33/54 | YP_527963.1 |
Size, proposed functions, source of closest homologs, and their accession number and percentage of identity and similarity are determined. AT, acyltransferase; DH, dehydratase; GNAT, Gcn 5-N-acetyl transferase; ACP, acyl carrier protein; KS, ketosynthase; KR, ketoreductase; MT, methyl transferase; PKS, polyketide synthase; R, enoyl reductase; TE, thioesterase.