Wild type EPEC |
Prototypical strain E2348/69 |
[38]
|
Δmap
|
Lacking the map gene |
[18]
|
ΔespF
|
Lacking the espF gene |
[39]
|
Δquad |
Lacking map, espF, tir and eae (encodes Intimin) genes |
[40]
|
ΔmapespF
|
Lacking map and espF genes |
[17]
|
ΔTTSS |
Type three secretion mutant deletion for espA
|
[41]
|
Plasmids
|
Description
|
Source/Reference
|
pd2-CMV-EGFP |
Mammalian EGFP expression |
This study |
pEGFP-MITO |
Mitochondrial targeting sequence of cytochrome c fused to EGFP |
[23]
|
pespF
|
pBR322 vector for bacterial expression of espF
|
[20]
|
p(L16E)espF
|
pBR322 vector for bacterial expression of espF missing the mitochondrial localisation sequence |
[20]
|
pespF(D3) |
the critical arginines of espF in the three SNX9 motifs exchanged for aspartic acid |
[28]
|
pespF (A3) |
espF expression with all three critical leucine in the N-WASP binding motif exchanged for alanine |
This study |
pespF (A2) |
As above, with only 2 leucine exchanged – L104A and L197A |
This study |
pespF (A1) |
As above, with only 1 leucine exchanged – L104A |
This study |
pTccp |
Bacterial expression – espF homologue Tccp |
[23]
|
pSK-map
|
pBluescript based bacterial expression vector for map
|
[18]
|
pSK-mapΔTRL |
pSK-map with the C-terminal DTRL amino acids removed |
This study |
pSK-mapΔE78A |
pSK-map with the E78A substitution |
Thus study |
|
|
|
Cell lines
|
Description
|
Source/Reference
|
Caco-2 |
Heterogeneous model for small intestinal enterocytes. |
ATCC HTB-37 |
TC-7 |
Homogeneous Caco-2 clone |
[10]
|
HeLa |
Human cervical carcinoma cells |
ATCC No. CCL-2 |
Clones NCL1-NCL12 |
Caco-2 clones |
This study |
BBE1 |
Caco-2 clone with dense brush border |
[11]
|
Primers
|
P1-E78A |
GCAATGGTTCAAGCAAGCGCAGATTACTTTTCTATCC
|
|
P-ΔTRL PS |
CGGAATTCATGTTTAGTCCAACGGC
|
|
P-ΔTRL NS |
CGGTCGACCTAATCCTGCACATTGTC
|
|
P-EspF NW NS |
CGATAGTTCATAGGCAGCTGCTGCATGATCTTTTAGTGCCTGTGC
|
|