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. 2013 Jan 28;8(1):e55284. doi: 10.1371/journal.pone.0055284

Table 1. Bacterial strains, plasmids and cell lines used in this study.

Enteropathogenic E. coli strain Description Source/Reference
Wild type EPEC Prototypical strain E2348/69 [38]
Δmap Lacking the map gene [18]
ΔespF Lacking the espF gene [39]
Δquad Lacking map, espF, tir and eae (encodes Intimin) genes [40]
ΔmapespF Lacking map and espF genes [17]
ΔTTSS Type three secretion mutant deletion for espA [41]
Plasmids Description Source/Reference
pd2-CMV-EGFP Mammalian EGFP expression This study
pEGFP-MITO Mitochondrial targeting sequence of cytochrome c fused to EGFP [23]
pespF pBR322 vector for bacterial expression of espF [20]
p(L16E)espF pBR322 vector for bacterial expression of espF missing the mitochondrial localisation sequence [20]
pespF(D3) the critical arginines of espF in the three SNX9 motifs exchanged for aspartic acid [28]
pespF (A3) espF expression with all three critical leucine in the N-WASP binding motif exchanged for alanine This study
pespF (A2) As above, with only 2 leucine exchanged – L104A and L197A This study
pespF (A1) As above, with only 1 leucine exchanged – L104A This study
pTccp Bacterial expression – espF homologue Tccp [23]
pSK-map pBluescript based bacterial expression vector for map [18]
pSK-mapΔTRL pSK-map with the C-terminal DTRL amino acids removed This study
pSK-mapΔE78A pSK-map with the E78A substitution Thus study
Cell lines Description Source/Reference
Caco-2 Heterogeneous model for small intestinal enterocytes. ATCC HTB-37
TC-7 Homogeneous Caco-2 clone [10]
HeLa Human cervical carcinoma cells ATCC No. CCL-2
Clones NCL1-NCL12 Caco-2 clones This study
BBE1 Caco-2 clone with dense brush border [11]
Primers
P1-E78A GCAATGGTTCAAGCAAGCGCAGATTACTTTTCTATCC
P-ΔTRL PS CGGAATTCATGTTTAGTCCAACGGC
P-ΔTRL NS CGGTCGACCTAATCCTGCACATTGTC
P-EspF NW NS CGATAGTTCATAGGCAGCTGCTGCATGATCTTTTAGTGCCTGTGC