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. Author manuscript; available in PMC: 2014 Feb 1.
Published in final edited form as: J Mol Graph Model. 2012 Nov 27;39:133–144. doi: 10.1016/j.jmgm.2012.09.005

Figure 5.

Figure 5

Steps leading to the putative Mode 1 to Mode 2 rearrangement. In Mode 1, the N-terminal tail of one UmuD (green) can potentially bind to the backside of RecA1 (yellow) and inhibit the RecA1 rearrangement, until UmuD is proteolyzed to UmuD′, which yields a shorter N-terminal tail that can no longer interact with RecA1 (see text) and might allow rearrangement to Mode 2.