Table 2. Nonprimate hepaciviruses primer sequences for 5′UTR, NS3, and NS5B in samples from horses, United Kingdom*.

Primer	Position	Sequence, 5′ →3′
EQ5→UTROS	Forward outer sense	ACA YYA CCA TGT GTC ACT CCC CCT
EQ5→UTROAS	Reverse outer antisense	CYC ATG TCC TAT GGT CTA CGA GA
EQ5→UTRIS	Forward inner sense	ACA CGG AAA YGG GTT AAC CAY ACY C
EQ5→UTRIAS	Reverse inner antisense	GCC CTC GCA AGC ATC CTA TCA G
EQNS3OS	Forward outer sense	ATW TGT GAT GAR TGC CAY AGY AC
EQNS3OAS	Reverse outer antisense	TAG TAG GTB ACA GCR TTA GCY CC
EQNS3IS	Forward inner sense	TCY AAR GGT GTD AAG CTT GTT GT
EQNS3IAS	Reverse inner antisense	TGG CAG AAG YTA AGR TGY CTY CC
EQNS5BIS	Forward outer sense	AAR TGY TTT GAC TCY ACB GTC ACT C
EQNS5BOIAS	Reverse outer antisense	ACT RTG ACT RAT YGT YTC CCA ACT CG
EQNS5BIS2	Forward inner sense	CAY GAT ATA GAH ACT GAG AGR GA
EQNS5BIAS2	Reverse inner antisense	TCR TCT TCC TCR ACG CCY TTR CTG G

*UTR, untranslated region; NS, nonstructural protein.