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. 2013 Jan 29;8(1):e54468. doi: 10.1371/journal.pone.0054468

Table 2. Suggestive QTLs associated with height and diameter identified in Populus family 331 F2 pedigree.

Linkage group Marker at QTL peak LOD score LOD threshold (LG) Level of significance LG (GW) Trait % PVE Mu(ac) Mu(ad) Mu(bc) Mu(bd) a d d/|a|
IA TCCGT-12 2.14 2.9 0.199 (0.777) Boardman 4 yr diameter 5.8 3.5 3.9 4.2 3.8 −0.15 0.40 2.67
IA CCCTT-N6 2.49 3.0 0.103 (0.749) Boardman 4 yr height 5.1 329.2 360.2 381.3 355.7 −13.25 28.30 2.14
IA CCCTT-N6 2.15 3.0 0.172 (0.940) Clatskanie 4 yr diameter 5.6 8.2 10.1 11.1 9.0 −0.40 2.00 5.00
IA CCCTT-N6 2.18 3.2 0.221 (0.955) Clatskanie 4 yr height 5.7 8.6 10.1 10.5 9.0 −0.20 1.50 7.50
IA TCCGT-N11 2.55 2.9 0.078 (0.688) Clatskanie 8 yr height 3.7 120.3 123.4 134.5 122.1 −0.90 7.75 8.60
VI O_050 2.95 3.0 0.054 (0.472) Boardman 4 yr diameter 4.4 4.1 3.7 4.1 3.7 0.20 0.00 0.00
VI O_050 2.61 3.1 0.098 (0.724) Boardman 4 yr height 4.0 367.6 340.2 376.1 344.4 11.60 2.15 0.19
VI O_050 2.49 2.9 0.101 (0.755) Clatskanie 8 yr height 3.8 123.6 119.4 132.7 122.6 0.50 2.95 5.90
XVIII ACACC-N21 2.66 2.8 0.061 (0.690) Clatskanie 4 yr diameter 5.3 8.3 11.0 10.0 9.1 −0.40 1.80 4.50
XVIII O_480 2.47 2.7 0.080 (0.828) Clatskanie 4 yr height 4.5 8.5 10.3 9.5 9.7 −0.60 0.80 1.33

LG = Linkage groupwise significance; GW = Genomewise significance.