Table 3. Nucleotide content and gene count levels of the genome.
| Attribute | Value | % of totala |
|---|---|---|
| Genome Size (bp) | 4,470,622 | 100.0% |
| Coding region (bp) | 3,837,687 | 85.8% |
| G+C content (bp) | 2,377,733 | 53.2% |
| Number of replicons | 1 | |
| Extrachromosomal elements | 1 | |
| Total genes | 4,795 | |
| RNA genes | 72 | |
| rRNA operons | 3 | |
| Protein-coding genes | 4,723 | 100.0% |
| Pseudo genes | 0 | 0.0% |
| Genes with function prediction | 2,483 | 52.6% |
| Genes in paralog clusters | 1,666 | 35.3% |
| Genes assigned to COGs | 3,037 | 64.3% |
| Genes assigned Pfam domains | 3,007 | 63.7% |
| Genes with signal peptides | 1,064 | 22.5% |
| Genes with transmembrane helices | 1,002 | 21.2% |
| Paralogous groups | 500 | % of totala |
a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.