Table 5. Vibriophage VvAW1 gene annotations*.
| Gene | Strand | Function or Similarity | Evidence or Organism | Accession Num. | % Id | E-Value |
|---|---|---|---|---|---|---|
| 1 | - | DNA methylase | COG4646 | COG4646 | 24 | 8.0e-65 |
| 2 | - | hypothetical protein | Thalassomonas phage Ba3 | NC_009990 | 43 | 2.0e-63 |
| 3 | - | phage DNA transfer protein | Xyella fastidiosa M12 | CP000941 | 35 | 1.0e-19 |
| 4 | - | hypothetical phage protein | PHA00672 | cl10253 | nr | 2.4e-42 |
| 5 | - | hypothetical protein | none | n/a | n/a | n/a |
| 6 | - | phage tail collar protein | pfam07484 | n/a | nr | 1.5e-05 |
| 7 | - | phage stabilization prot., gp 10 | Xyella phage Xfas53 | GQ421471 | 36 | 1.0e-25 |
| 8 | - | hypothetical protein | Thalassomonas phage Ba3 | NC_009990 | 34 | 2.0e-25 |
| 9 | - | hypothetical protein | Thalassomonas phage Ba3 | NC_009990 | 52 | 4.0e-06 |
| 10 | - | P22 coat protein, gp5 | pfam11651 | cl0373 | nr | 1.3e-82 |
| 11 | - | scaffold protein | EBPR podovirus | AE170876 | 36 | 4.0e-30 |
| 12 | - | portal protein | EBPR podovirus | AE170876 | 38 | 1.0e-127 |
| 13 | - | terminase large subunit | Shigella phage Shfl1 | NC_015456 | 39 | 0.0e+00 |
| 14 | - | terminase, small subunit | pfam03592 | cl01513 | nr | 4.0e-09 |
| 15 | - | hypothetical phage protein | PHA000821 | cl10282 | nr | 5.8e-10 |
| 16 | - | holin protein | Psychrobacter phage psymv2 | AEO01029 | 46 | 1.0e-13 |
| 17 | - | hypothetical protein | Acinetobacter phage AB1 | ADO14413 | 48 | 4.0e-21 |
| 18 | - | hypothetical protein | Vibrio sp. AND4 | ZP_02196938 | 32 | 3.0e-12 |
| 19 | - | endolysin | Bacteriophage P27 | 103807.1 | 37 | 2.0e-11 |
| 20 | - | hypothetical protein | none | n/a | n/a | n/a |
| 21 | - | ssDNA binding protein | COG0629 | COG0629 | 43 | 4.0e-36 |
| 22 | - | hypothetical protein | none | n/a | n/a | n/a |
| 23 | - | con. protein, unknown func. | DUF2303 | cl02338 | nr | 5.1e-86 |
| 24 | - | hypothetical protein | CPS-53 prophage | AEQ15784 | 47 | 3.0e-27 |
| 25 | - | hypothetical protein | Pseudomonas phage D3 | NP_061574 | 34 | 3.0e-19 |
| 26 | - | RNA-binding regulator protein | COG1551 | COG1551 | 43 | 6.0e-10 |
| 27 | - | exonuclease | pfam00929 | cl0219 | nr | 1.1e-17 |
| 28 | - | hypothetical protein | Pseudomonas phage F116 | AY625898 | 40 | 0.0e+00 |
| 29 | - | hypothetical protein | Pseudomonas phage F116 | AY625898 | 43 | 0.0e+00 |
| 30 | - | hypothetical protein | Pectobacteria phage ZF40 | AFC22460.1 | 35 | 4.0e-05 |
| 31 | - | hypothetical protein | none | n/a | n/a | n/a |
| 32 | + | lambda-like repressor, HTH mot. | SSF47413 | IPR010982 | nr | 1.6e-07 |
| 33 | + | hypothetical protein | Thalassomonas phage Ba3 | NC_009990 | 46 | 3.0e-19 |
| 34 | + | con. protein, unknown func. | DUF3268 | cl13172 | nr | 1.7e-29 |
| 35 | + | hypothetical protein | Vibrio cholerae MZO-3 | ZP_01955042 | 40 | 1.0e-47 |
| 36 | + | hypothetical protein | Opitutacecae sp. TAV5 | ZP_09596846 | 50 | 1.0e-27 |
| 37 | + | con. protein, unknown func. | DUF1367 | cl06231 | nr | 1.7e-51 |
| 38 | + | con. protein, unknown func. | DUF1364 | cl06229 | nr | 5.1e-38 |
| 39 | - | hypothetical protein | Roseobacter denitrificans | YP_771820 | 29 | 4.0e-09 |
| 40 | - | cellulosome enzyme | Acinetobacter baumanni | ZP_05829744 | 36 | 1.0e-92 |
*Genes are listed by number, along with their predicted function, if known, followed by the nature of the evidence (e.g., COG group) that supports the functional classification. Genes with no functional prediction, but with significant (E < 10-5) sequence similarity to genes in the NCBI database as determined by blastp, are listed, followed by the name of the organism in which the similar gene was found.