Table 1. Classification and general features of Alistipes senegalensis strain JC50T.
MIGS ID | Property | Term | Evidence codea |
---|---|---|---|
Domain Bacteria | TAS [11] | ||
Phylum Bacteroidetes | TAS [12,13] | ||
Class Bacteroidia | TAS [12,14] | ||
Current classification | Order Bacteroidales | TAS [12,15] | |
Family Rikenellaceae | TAS [12,16] | ||
Genus Alistipes | TAS [12,17] | ||
Species Alistipes senegalensis | IDA | ||
Type strain JC50T | IDA | ||
Gram stain | negative | IDA | |
Cell shape | bacilli | IDA | |
Motility | nonmotile | IDA | |
Sporulation | nonsporulating | IDA | |
Temperature range | mesophileic | IDA | |
Optimum temperature | 37°C | IDA | |
MIGS-6.3 | Salinity | growth in BHI medium + 1% NaCl | IDA |
MIGS-22 | Oxygen requirement | anaerobic | IDA |
Carbon source | unknown | ||
Energy source | unknown | ||
MIGS-6 | Habitat | human gut | IDA |
MIGS-15 | Biotic relationship | free living | IDA |
MIGS-14 | Pathogenicity | unknown | |
Biosafety level | 2 | ||
Isolation | human feces | ||
MIGS-4 | Geographic location | Senegal | IDA |
MIGS-5 | Sample collection time | September 2010 | IDA |
MIGS-4.1 | Latitude | 14.49740 | IDA |
MIGS-4.2 | Longitude | -14.452362 | IDA |
MIGS-4.3 | Depth | surface | IDA |
MIGS-4.4 | Altitude | 51 m above sea level | IDA |
Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [18]. If the evidence is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.