Table 3. Genome Statistics.
| Attribute | Value | % of Totala |
|---|---|---|
| Genome size (bp) | 3,557,831 | 100.00% |
| DNA coding region (bp) | 3,106,298 | 87.31% |
| DNA G+C content (bp) | 2,019,235 | 56.75% |
| Number of replicons | 2 | |
| Extrachromosomal elements | 1 | |
| Total genes | 3,695 | |
| RNA genes | 69 | |
| rRNA operons | 5 | |
| Protein-coding genes | 3,626 | 100.00% |
| Pseudo genes | 155 | 4.27% |
| Genes with function prediction | 2,475 | 68.26% |
| Genes in paralog clusters | 1,896 | 52.29% |
| Genes assigned to COGs | 2,740 | 75.57% |
| Genes assigned Pfam domains | 413 | 11.39% |
| Genes with signal peptides | 652 | 17.98% |
| Genes with transmembrane helices | 910 | 25.10% |
| CRISPR repeats | 2 |
a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.